Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPL39P62891 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC11.74□□□□□ -0.53
RPL39P62891 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
RPL39P62891 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPL39P62891 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC11.74□□□□□ -0.53
RPL39P62891 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPL39P62891 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPL39P62891 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPL39P62891 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
RPL39P62891 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
RPL39P62891 AC097637.2-201ENST00000624096 1997 ntBASIC11.74□□□□□ -0.53
RPL39P62891 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC11.74□□□□□ -0.53
RPL39P62891 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPL39P62891 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
RPL39P62891 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPL39P62891 ACE-203ENST00000413513 2237 ntTSL 2 BASIC11.74□□□□□ -0.53
RPL39P62891 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
RPL39P62891 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPL39P62891 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
RPL39P62891 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
RPL39P62891 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
RPL39P62891 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC11.73□□□□□ -0.53
RPL39P62891 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC11.73□□□□□ -0.53
RPL39P62891 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC11.73□□□□□ -0.53
RPL39P62891 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC11.73□□□□□ -0.53
RPL39P62891 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC11.73□□□□□ -0.53
RPL39P62891 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
RPL39P62891 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC11.73□□□□□ -0.53
RPL39P62891 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC11.73□□□□□ -0.53
RPL39P62891 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 SPDYE13P-201ENST00000445314 798 ntBASIC11.73□□□□□ -0.53
RPL39P62891 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC11.73□□□□□ -0.53
RPL39P62891 HOMER2P1-201ENST00000455653 964 ntBASIC11.73□□□□□ -0.53
RPL39P62891 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 LINC02447-202ENST00000501888 2146 ntBASIC11.73□□□□□ -0.53
RPL39P62891 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
RPL39P62891 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC11.73□□□□□ -0.53
RPL39P62891 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC11.73□□□□□ -0.53
RPL39P62891 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC11.73□□□□□ -0.53
RPL39P62891 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC11.73□□□□□ -0.53
RPL39P62891 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC11.73□□□□□ -0.53
RPL39P62891 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC11.73□□□□□ -0.53
RPL39P62891 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
RPL39P62891 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC11.73□□□□□ -0.53
RPL39P62891 IGHV3-41-201ENST00000613121 348 ntBASIC11.73□□□□□ -0.53
RPL39P62891 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC11.73□□□□□ -0.53
RPL39P62891 PPT1-215ENST00000641471 2368 ntBASIC11.73□□□□□ -0.53
RPL39P62891 AL031731.1-201ENST00000642131 2094 ntBASIC11.73□□□□□ -0.53
RPL39P62891 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
RPL39P62891 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
RPL39P62891 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC11.73□□□□□ -0.53
RPL39P62891 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
RPL39P62891 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
RPL39P62891 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC11.73□□□□□ -0.53
RPL39P62891 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RPL39P62891 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC11.73□□□□□ -0.53
RPL39P62891 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC11.73□□□□□ -0.53
RPL39P62891 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RPL39P62891 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
RPL39P62891 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
RPL39P62891 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RPL39P62891 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
RPL39P62891 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RPL39P62891 CDC14C-201ENST00000428251 1719 ntBASIC11.72□□□□□ -0.53
RPL39P62891 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RPL39P62891 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RPL39P62891 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RPL39P62891 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RPL39P62891 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
RPL39P62891 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms