Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP46P62068 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP46P62068 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP46P62068 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.38■□□□□ 0.37
USP46P62068 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USP46P62068 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP46P62068 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.38■□□□□ 0.37
USP46P62068 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP46P62068 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP46P62068 NKILA-202ENST00000614771 2598 ntBASIC17.37■□□□□ 0.37
USP46P62068 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP46P62068 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP46P62068 AC011676.5-201ENST00000624864 2660 ntBASIC17.37■□□□□ 0.37
USP46P62068 AC008677.1-201ENST00000519230 1561 ntBASIC17.37■□□□□ 0.37
USP46P62068 AC078925.2-201ENST00000624013 1973 ntBASIC17.37■□□□□ 0.37
USP46P62068 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP46P62068 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP46P62068 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP46P62068 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
USP46P62068 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
USP46P62068 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP46P62068 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.37■□□□□ 0.37
USP46P62068 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.37■□□□□ 0.37
USP46P62068 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.37■□□□□ 0.37
USP46P62068 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
USP46P62068 ALG1L8P-201ENST00000533887 760 ntBASIC17.37■□□□□ 0.37
USP46P62068 AC069262.1-201ENST00000539058 672 ntBASIC17.37■□□□□ 0.37
USP46P62068 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP46P62068 DUX4L27-201ENST00000554796 1261 ntBASIC17.37■□□□□ 0.37
USP46P62068 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.37■□□□□ 0.37
USP46P62068 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP46P62068 AC015911.4-201ENST00000588022 1070 ntBASIC17.37■□□□□ 0.37
USP46P62068 AC073389.1-201ENST00000595595 795 ntBASIC17.37■□□□□ 0.37
USP46P62068 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.37■□□□□ 0.37
USP46P62068 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP46P62068 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.37■□□□□ 0.37
USP46P62068 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP46P62068 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP46P62068 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP46P62068 AC073439.1-201ENST00000624121 1774 ntBASIC17.37■□□□□ 0.37
USP46P62068 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP46P62068 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP46P62068 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP46P62068 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.37■□□□□ 0.37
USP46P62068 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP46P62068 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP46P62068 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP46P62068 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP46P62068 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP46P62068 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP46P62068 AC022211.2-201ENST00000585075 2527 ntBASIC17.37■□□□□ 0.37
USP46P62068 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP46P62068 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP46P62068 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP46P62068 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
USP46P62068 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP46P62068 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.36■□□□□ 0.37
USP46P62068 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP46P62068 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP46P62068 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.36■□□□□ 0.37
USP46P62068 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP46P62068 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP46P62068 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP46P62068 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP46P62068 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP46P62068 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP46P62068 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP46P62068 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP46P62068 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.36■□□□□ 0.37
USP46P62068 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.36■□□□□ 0.37
USP46P62068 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP46P62068 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.36■□□□□ 0.37
USP46P62068 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.36■□□□□ 0.37
USP46P62068 FAM86GP-201ENST00000448322 971 ntBASIC17.36■□□□□ 0.37
USP46P62068 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.36■□□□□ 0.37
USP46P62068 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP46P62068 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.36■□□□□ 0.37
USP46P62068 PRYP6-201ENST00000514804 343 ntBASIC17.36■□□□□ 0.37
USP46P62068 AC105233.2-201ENST00000523697 349 ntBASIC17.36■□□□□ 0.37
USP46P62068 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.36■□□□□ 0.37
USP46P62068 AF228730.5-201ENST00000530288 346 ntBASIC17.36■□□□□ 0.37
USP46P62068 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP46P62068 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.36■□□□□ 0.37
USP46P62068 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP46P62068 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
USP46P62068 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP46P62068 AL031731.1-201ENST00000642131 2094 ntBASIC17.36■□□□□ 0.37
USP46P62068 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.36■□□□□ 0.37
USP46P62068 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP46P62068 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP46P62068 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP46P62068 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP46P62068 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP46P62068 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP46P62068 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.36■□□□□ 0.37
USP46P62068 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
USP46P62068 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
USP46P62068 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP46P62068 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP46P62068 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms