Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.75□□□□□ -0.05
GFRA1P56159 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GFRA1P56159 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
GFRA1P56159 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GFRA1P56159 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GFRA1P56159 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
GFRA1P56159 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.75□□□□□ -0.05
GFRA1P56159 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
GFRA1P56159 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
GFRA1P56159 HMGN1P19-201ENST00000436976 333 ntBASIC14.75□□□□□ -0.05
GFRA1P56159 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.75□□□□□ -0.05
GFRA1P56159 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GFRA1P56159 AC125807.1-201ENST00000483097 614 ntBASIC14.75□□□□□ -0.05
GFRA1P56159 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GFRA1P56159 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.75□□□□□ -0.05
GFRA1P56159 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.75□□□□□ -0.05
GFRA1P56159 MIR4453-201ENST00000584019 89 ntBASIC14.75□□□□□ -0.05
GFRA1P56159 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.75□□□□□ -0.05
GFRA1P56159 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.75□□□□□ -0.05
GFRA1P56159 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GFRA1P56159 AC092171.3-201ENST00000610122 2651 ntBASIC14.75□□□□□ -0.05
GFRA1P56159 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GFRA1P56159 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.75□□□□□ -0.05
GFRA1P56159 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GFRA1P56159 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GFRA1P56159 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
GFRA1P56159 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
GFRA1P56159 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GFRA1P56159 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.75□□□□□ -0.05
GFRA1P56159 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
GFRA1P56159 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.75□□□□□ -0.05
GFRA1P56159 AC005622.1-201ENST00000636801 1703 ntBASIC14.75□□□□□ -0.05
GFRA1P56159 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
GFRA1P56159 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
GFRA1P56159 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GFRA1P56159 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GFRA1P56159 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GFRA1P56159 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
GFRA1P56159 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
GFRA1P56159 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GFRA1P56159 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
GFRA1P56159 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
GFRA1P56159 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.74□□□□□ -0.05
GFRA1P56159 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.74□□□□□ -0.05
GFRA1P56159 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
GFRA1P56159 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GFRA1P56159 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GFRA1P56159 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GFRA1P56159 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
GFRA1P56159 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.74□□□□□ -0.05
GFRA1P56159 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.74□□□□□ -0.05
GFRA1P56159 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.74□□□□□ -0.05
GFRA1P56159 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.74□□□□□ -0.05
GFRA1P56159 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.74□□□□□ -0.05
GFRA1P56159 DUX4L27-201ENST00000554796 1261 ntBASIC14.74□□□□□ -0.05
GFRA1P56159 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.74□□□□□ -0.05
GFRA1P56159 AC007967.4-201ENST00000614700 386 ntBASIC14.74□□□□□ -0.05
GFRA1P56159 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GFRA1P56159 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
GFRA1P56159 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.74□□□□□ -0.05
GFRA1P56159 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
GFRA1P56159 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
GFRA1P56159 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GFRA1P56159 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GFRA1P56159 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
GFRA1P56159 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.74□□□□□ -0.05
GFRA1P56159 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
GFRA1P56159 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
GFRA1P56159 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
GFRA1P56159 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
GFRA1P56159 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GFRA1P56159 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.73□□□□□ -0.05
GFRA1P56159 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
GFRA1P56159 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GFRA1P56159 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GFRA1P56159 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GFRA1P56159 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.73□□□□□ -0.05
GFRA1P56159 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
GFRA1P56159 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GFRA1P56159 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GFRA1P56159 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.73□□□□□ -0.05
GFRA1P56159 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.73□□□□□ -0.05
GFRA1P56159 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GFRA1P56159 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
GFRA1P56159 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
GFRA1P56159 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GFRA1P56159 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.73□□□□□ -0.05
GFRA1P56159 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GFRA1P56159 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GFRA1P56159 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GFRA1P56159 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GFRA1P56159 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.73□□□□□ -0.05
GFRA1P56159 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.73□□□□□ -0.05
GFRA1P56159 AC107890.1-201ENST00000422478 521 ntBASIC14.73□□□□□ -0.05
GFRA1P56159 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
GFRA1P56159 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.73□□□□□ -0.05
GFRA1P56159 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.73□□□□□ -0.05
GFRA1P56159 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
GFRA1P56159 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.73□□□□□ -0.05
GFRA1P56159 POU5F1P6-201ENST00000466990 990 ntBASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms