Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT6CP48668 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT6CP48668 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.07■□□□□ 0.16
KRT6CP48668 MRPL20P1-201ENST00000400819 433 ntBASIC16.07■□□□□ 0.16
KRT6CP48668 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
KRT6CP48668 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.07■□□□□ 0.16
KRT6CP48668 DUSP5P1-201ENST00000441325 1139 ntBASIC16.07■□□□□ 0.16
KRT6CP48668 AC018712.1-201ENST00000455767 687 ntBASIC16.07■□□□□ 0.16
KRT6CP48668 POU5F1P6-201ENST00000466990 990 ntBASIC16.07■□□□□ 0.16
KRT6CP48668 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.07■□□□□ 0.16
KRT6CP48668 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.07■□□□□ 0.16
KRT6CP48668 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.07■□□□□ 0.16
KRT6CP48668 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.07■□□□□ 0.16
KRT6CP48668 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.07■□□□□ 0.16
KRT6CP48668 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.07■□□□□ 0.16
KRT6CP48668 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.07■□□□□ 0.16
KRT6CP48668 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.07■□□□□ 0.16
KRT6CP48668 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.07■□□□□ 0.16
KRT6CP48668 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.07■□□□□ 0.16
KRT6CP48668 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KRT6CP48668 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
KRT6CP48668 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.07■□□□□ 0.16
KRT6CP48668 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT6CP48668 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KRT6CP48668 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT6CP48668 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT6CP48668 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.07■□□□□ 0.16
KRT6CP48668 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.07■□□□□ 0.16
KRT6CP48668 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
KRT6CP48668 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.07■□□□□ 0.16
KRT6CP48668 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KRT6CP48668 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT6CP48668 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT6CP48668 PCDHA1-201ENST00000378133 2726 ntBASIC16.07■□□□□ 0.16
KRT6CP48668 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT6CP48668 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.07■□□□□ 0.16
KRT6CP48668 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
KRT6CP48668 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
KRT6CP48668 FLJ16779-201ENST00000612722 7638 ntBASIC16.06■□□□□ 0.16
KRT6CP48668 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6CP48668 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6CP48668 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.06■□□□□ 0.16
KRT6CP48668 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6CP48668 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
KRT6CP48668 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6CP48668 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6CP48668 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.06■□□□□ 0.16
KRT6CP48668 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.06■□□□□ 0.16
KRT6CP48668 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6CP48668 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.06■□□□□ 0.16
KRT6CP48668 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
KRT6CP48668 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
KRT6CP48668 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6CP48668 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6CP48668 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
KRT6CP48668 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6CP48668 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6CP48668 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.06■□□□□ 0.16
KRT6CP48668 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.06■□□□□ 0.16
KRT6CP48668 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6CP48668 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.06■□□□□ 0.16
KRT6CP48668 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6CP48668 KRT18P67-201ENST00000432816 1264 ntBASIC16.06■□□□□ 0.16
KRT6CP48668 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.06■□□□□ 0.16
KRT6CP48668 EMBP1-201ENST00000458200 901 ntBASIC16.06■□□□□ 0.16
KRT6CP48668 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6CP48668 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.06■□□□□ 0.16
KRT6CP48668 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.06■□□□□ 0.16
KRT6CP48668 AC020765.3-201ENST00000613051 740 ntBASIC16.06■□□□□ 0.16
KRT6CP48668 TP73-AS1-207ENST00000624167 988 ntBASIC16.06■□□□□ 0.16
KRT6CP48668 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6CP48668 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6CP48668 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.06■□□□□ 0.16
KRT6CP48668 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6CP48668 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.06■□□□□ 0.16
KRT6CP48668 AL136379.1-201ENST00000623471 2642 ntBASIC16.06■□□□□ 0.16
KRT6CP48668 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.06■□□□□ 0.16
KRT6CP48668 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6CP48668 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.06■□□□□ 0.16
KRT6CP48668 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
KRT6CP48668 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6CP48668 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.06■□□□□ 0.16
KRT6CP48668 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.05■□□□□ 0.16
KRT6CP48668 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
KRT6CP48668 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT6CP48668 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT6CP48668 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT6CP48668 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT6CP48668 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT6CP48668 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT6CP48668 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.05■□□□□ 0.16
KRT6CP48668 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.05■□□□□ 0.16
KRT6CP48668 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
KRT6CP48668 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.05■□□□□ 0.16
KRT6CP48668 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.05■□□□□ 0.16
KRT6CP48668 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.05■□□□□ 0.16
KRT6CP48668 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
KRT6CP48668 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT6CP48668 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT6CP48668 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms