Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COPB2P35606 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
COPB2P35606 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.81■□□□□ 0.6
COPB2P35606 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.81■□□□□ 0.6
COPB2P35606 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
COPB2P35606 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
COPB2P35606 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
COPB2P35606 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.81■□□□□ 0.6
COPB2P35606 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
COPB2P35606 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.81■□□□□ 0.6
COPB2P35606 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COPB2P35606 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
COPB2P35606 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COPB2P35606 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COPB2P35606 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COPB2P35606 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
COPB2P35606 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COPB2P35606 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COPB2P35606 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COPB2P35606 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COPB2P35606 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.8■□□□□ 0.6
COPB2P35606 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.8■□□□□ 0.6
COPB2P35606 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
COPB2P35606 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COPB2P35606 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COPB2P35606 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
COPB2P35606 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COPB2P35606 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COPB2P35606 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COPB2P35606 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COPB2P35606 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
COPB2P35606 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.8■□□□□ 0.6
COPB2P35606 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.8■□□□□ 0.6
COPB2P35606 SERBP1P3-201ENST00000459980 809 ntBASIC18.8■□□□□ 0.6
COPB2P35606 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.8■□□□□ 0.6
COPB2P35606 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.8■□□□□ 0.6
COPB2P35606 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.8■□□□□ 0.6
COPB2P35606 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
COPB2P35606 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.8■□□□□ 0.6
COPB2P35606 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COPB2P35606 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
COPB2P35606 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COPB2P35606 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COPB2P35606 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COPB2P35606 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.8■□□□□ 0.6
COPB2P35606 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COPB2P35606 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COPB2P35606 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
COPB2P35606 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COPB2P35606 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COPB2P35606 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COPB2P35606 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
COPB2P35606 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.8■□□□□ 0.6
COPB2P35606 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.8■□□□□ 0.6
COPB2P35606 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.8■□□□□ 0.6
COPB2P35606 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
COPB2P35606 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.8■□□□□ 0.6
COPB2P35606 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
COPB2P35606 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COPB2P35606 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COPB2P35606 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
COPB2P35606 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
COPB2P35606 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
COPB2P35606 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COPB2P35606 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COPB2P35606 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COPB2P35606 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COPB2P35606 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.79■□□□□ 0.6
COPB2P35606 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COPB2P35606 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
COPB2P35606 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.79■□□□□ 0.6
COPB2P35606 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.79■□□□□ 0.6
COPB2P35606 AL596325.1-201ENST00000563991 1082 ntBASIC18.79■□□□□ 0.6
COPB2P35606 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COPB2P35606 AC008738.7-201ENST00000609744 511 ntBASIC18.79■□□□□ 0.6
COPB2P35606 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
COPB2P35606 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COPB2P35606 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
COPB2P35606 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COPB2P35606 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COPB2P35606 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
COPB2P35606 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.79■□□□□ 0.6
COPB2P35606 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.79■□□□□ 0.6
COPB2P35606 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COPB2P35606 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COPB2P35606 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COPB2P35606 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
COPB2P35606 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COPB2P35606 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.78■□□□□ 0.6
COPB2P35606 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.78■□□□□ 0.6
COPB2P35606 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
COPB2P35606 AC084018.2-201ENST00000613093 2607 ntBASIC18.78■□□□□ 0.6
COPB2P35606 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COPB2P35606 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
COPB2P35606 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COPB2P35606 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.78■□□□□ 0.6
COPB2P35606 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COPB2P35606 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COPB2P35606 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.78■□□□□ 0.6
COPB2P35606 RN7SL692P-201ENST00000464677 288 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms