Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.97■□□□□ 0.47
HOXD13P35453 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
HOXD13P35453 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
HOXD13P35453 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HOXD13P35453 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXD13P35453 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.96■□□□□ 0.47
HOXD13P35453 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.96■□□□□ 0.47
HOXD13P35453 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HOXD13P35453 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.96■□□□□ 0.47
HOXD13P35453 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.96■□□□□ 0.47
HOXD13P35453 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.96■□□□□ 0.47
HOXD13P35453 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXD13P35453 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.96■□□□□ 0.47
HOXD13P35453 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXD13P35453 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.96■□□□□ 0.47
HOXD13P35453 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.96■□□□□ 0.47
HOXD13P35453 UPF3AP3-201ENST00000420996 769 ntBASIC17.96■□□□□ 0.47
HOXD13P35453 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.96■□□□□ 0.47
HOXD13P35453 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
HOXD13P35453 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HOXD13P35453 FAM86C2P-203ENST00000528684 1004 ntBASIC17.96■□□□□ 0.47
HOXD13P35453 AC093520.2-201ENST00000561830 333 ntBASIC17.96■□□□□ 0.47
HOXD13P35453 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.96■□□□□ 0.47
HOXD13P35453 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.96■□□□□ 0.47
HOXD13P35453 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.96■□□□□ 0.47
HOXD13P35453 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HOXD13P35453 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.96■□□□□ 0.47
HOXD13P35453 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.96■□□□□ 0.47
HOXD13P35453 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
HOXD13P35453 AC008267.7-201ENST00000624570 1194 ntBASIC17.96■□□□□ 0.47
HOXD13P35453 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HOXD13P35453 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
HOXD13P35453 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXD13P35453 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.96■□□□□ 0.47
HOXD13P35453 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
HOXD13P35453 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
HOXD13P35453 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HOXD13P35453 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
HOXD13P35453 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
HOXD13P35453 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
HOXD13P35453 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
HOXD13P35453 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
HOXD13P35453 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.95■□□□□ 0.46
HOXD13P35453 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXD13P35453 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.95■□□□□ 0.46
HOXD13P35453 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
HOXD13P35453 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXD13P35453 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
HOXD13P35453 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.95■□□□□ 0.46
HOXD13P35453 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.95■□□□□ 0.46
HOXD13P35453 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
HOXD13P35453 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
HOXD13P35453 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXD13P35453 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXD13P35453 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXD13P35453 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.95■□□□□ 0.46
HOXD13P35453 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXD13P35453 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.95■□□□□ 0.46
HOXD13P35453 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.95■□□□□ 0.46
HOXD13P35453 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.95■□□□□ 0.46
HOXD13P35453 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.95■□□□□ 0.46
HOXD13P35453 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.95■□□□□ 0.46
HOXD13P35453 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
HOXD13P35453 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
HOXD13P35453 DNAJB3-201ENST00000446806 729 ntBASIC17.95■□□□□ 0.46
HOXD13P35453 CEND1P1-201ENST00000451006 455 ntBASIC17.95■□□□□ 0.46
HOXD13P35453 AC069335.1-201ENST00000489972 472 ntBASIC17.95■□□□□ 0.46
HOXD13P35453 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
HOXD13P35453 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXD13P35453 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
HOXD13P35453 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
HOXD13P35453 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
HOXD13P35453 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.95■□□□□ 0.46
HOXD13P35453 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.95■□□□□ 0.46
HOXD13P35453 AC022145.2-201ENST00000598203 171 ntBASIC17.95■□□□□ 0.46
HOXD13P35453 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.95■□□□□ 0.46
HOXD13P35453 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
HOXD13P35453 AC084121.4-201ENST00000641598 221 ntBASIC17.95■□□□□ 0.46
HOXD13P35453 AF228730.8-201ENST00000642140 221 ntBASIC17.95■□□□□ 0.46
HOXD13P35453 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
HOXD13P35453 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.95■□□□□ 0.46
HOXD13P35453 AC010491.1-201ENST00000563101 2797 ntBASIC17.95■□□□□ 0.46
HOXD13P35453 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXD13P35453 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
HOXD13P35453 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.95■□□□□ 0.46
HOXD13P35453 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXD13P35453 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HOXD13P35453 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.94■□□□□ 0.46
HOXD13P35453 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXD13P35453 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HOXD13P35453 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.94■□□□□ 0.46
HOXD13P35453 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HOXD13P35453 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXD13P35453 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXD13P35453 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
HOXD13P35453 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HOXD13P35453 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.94■□□□□ 0.46
HOXD13P35453 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HOXD13P35453 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.94■□□□□ 0.46
HOXD13P35453 SPDYE11-202ENST00000450699 704 ntBASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms