Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 USP32P1-208ENST00000506594 1164 ntBASIC21.97■■□□□ 1.11
USP6P35125 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC21.97■■□□□ 1.11
USP6P35125 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC21.97■■□□□ 1.11
USP6P35125 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC21.97■■□□□ 1.11
USP6P35125 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP6P35125 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC21.97■■□□□ 1.11
USP6P35125 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
USP6P35125 Six3os1_5.1-201ENST00000611000 271 ntBASIC21.97■■□□□ 1.11
USP6P35125 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP6P35125 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP6P35125 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP6P35125 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
USP6P35125 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC21.97■■□□□ 1.11
USP6P35125 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
USP6P35125 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC21.97■■□□□ 1.11
USP6P35125 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP6P35125 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP6P35125 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP6P35125 NSL1-201ENST00000366976 722 ntTSL 2 BASIC21.97■■□□□ 1.11
USP6P35125 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
USP6P35125 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
USP6P35125 RPL13P2-201ENST00000440687 659 ntBASIC21.97■■□□□ 1.11
USP6P35125 FXR1-221ENST00000491674 365 ntTSL 2 BASIC21.97■■□□□ 1.11
USP6P35125 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC21.97■■□□□ 1.11
USP6P35125 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
USP6P35125 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
USP6P35125 CLK3P2-201ENST00000427566 1453 ntBASIC21.97■■□□□ 1.11
USP6P35125 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
USP6P35125 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC21.96■■□□□ 1.11
USP6P35125 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.96■■□□□ 1.11
USP6P35125 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC21.96■■□□□ 1.11
USP6P35125 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP6P35125 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP6P35125 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
USP6P35125 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC21.96■■□□□ 1.11
USP6P35125 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC21.96■■□□□ 1.11
USP6P35125 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
USP6P35125 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
USP6P35125 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
USP6P35125 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP6P35125 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP6P35125 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP6P35125 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP6P35125 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP6P35125 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
USP6P35125 AC074338.1-201ENST00000416825 156 ntBASIC21.96■■□□□ 1.11
USP6P35125 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC21.96■■□□□ 1.11
USP6P35125 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC21.96■■□□□ 1.11
USP6P35125 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC21.96■■□□□ 1.11
USP6P35125 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC21.96■■□□□ 1.11
USP6P35125 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC21.96■■□□□ 1.11
USP6P35125 MIR4259-201ENST00000584466 101 ntBASIC21.96■■□□□ 1.11
USP6P35125 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
USP6P35125 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
USP6P35125 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
USP6P35125 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
USP6P35125 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP6P35125 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP6P35125 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC21.95■■□□□ 1.1
USP6P35125 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP6P35125 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
USP6P35125 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC21.95■■□□□ 1.1
USP6P35125 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
USP6P35125 LETM1P2-201ENST00000597330 2178 ntBASIC21.95■■□□□ 1.1
USP6P35125 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
USP6P35125 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP6P35125 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP6P35125 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP6P35125 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
USP6P35125 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC21.95■■□□□ 1.1
USP6P35125 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC21.95■■□□□ 1.1
USP6P35125 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC21.95■■□□□ 1.1
USP6P35125 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC21.95■■□□□ 1.1
USP6P35125 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC21.95■■□□□ 1.1
USP6P35125 AC092552.1-201ENST00000547243 906 ntBASIC21.95■■□□□ 1.1
USP6P35125 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC21.95■■□□□ 1.1
USP6P35125 NAA38-206ENST00000576384 424 ntTSL 2 BASIC21.95■■□□□ 1.1
USP6P35125 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP6P35125 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
USP6P35125 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
USP6P35125 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
USP6P35125 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
USP6P35125 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
USP6P35125 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
USP6P35125 AL592424.1-201ENST00000563624 1536 ntBASIC21.94■■□□□ 1.1
USP6P35125 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC21.94■■□□□ 1.1
USP6P35125 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
USP6P35125 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
USP6P35125 ANKRD19P-201ENST00000338192 862 ntBASIC21.94■■□□□ 1.1
USP6P35125 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
USP6P35125 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
USP6P35125 HIST1H2BPS3-201ENST00000419683 341 ntBASIC21.94■■□□□ 1.1
USP6P35125 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
USP6P35125 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC21.94■■□□□ 1.1
USP6P35125 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
USP6P35125 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC21.94■■□□□ 1.1
USP6P35125 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
USP6P35125 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
USP6P35125 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC21.94■■□□□ 1.1
USP6P35125 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms