Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CKS2P33552 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CKS2P33552 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC12.21□□□□□ -0.45
CKS2P33552 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC12.21□□□□□ -0.45
CKS2P33552 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CKS2P33552 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CKS2P33552 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.21□□□□□ -0.45
CKS2P33552 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC12.21□□□□□ -0.45
CKS2P33552 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CKS2P33552 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CKS2P33552 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CKS2P33552 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CKS2P33552 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
CKS2P33552 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CKS2P33552 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CKS2P33552 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CKS2P33552 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
CKS2P33552 HARS-203ENST00000431330 1774 ntTSL 2 BASIC12.21□□□□□ -0.45
CKS2P33552 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CKS2P33552 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC12.21□□□□□ -0.45
CKS2P33552 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CKS2P33552 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CKS2P33552 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC12.21□□□□□ -0.45
CKS2P33552 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CKS2P33552 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC12.21□□□□□ -0.45
CKS2P33552 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC12.21□□□□□ -0.45
CKS2P33552 RASA4DP-201ENST00000460726 1199 ntBASIC12.21□□□□□ -0.45
CKS2P33552 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC12.21□□□□□ -0.45
CKS2P33552 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CKS2P33552 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC12.21□□□□□ -0.45
CKS2P33552 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC12.21□□□□□ -0.45
CKS2P33552 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC12.21□□□□□ -0.45
CKS2P33552 ZNF444P1-201ENST00000559497 298 ntBASIC12.21□□□□□ -0.45
CKS2P33552 GCSHP2-201ENST00000560971 527 ntBASIC12.21□□□□□ -0.45
CKS2P33552 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CKS2P33552 AC079602.3-201ENST00000623931 403 ntBASIC12.21□□□□□ -0.45
CKS2P33552 AC073912.3-201ENST00000624414 853 ntBASIC12.21□□□□□ -0.45
CKS2P33552 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC12.21□□□□□ -0.45
CKS2P33552 AL139011.1-202ENST00000642063 584 ntBASIC12.21□□□□□ -0.45
CKS2P33552 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
CKS2P33552 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
CKS2P33552 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CKS2P33552 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC12.21□□□□□ -0.45
CKS2P33552 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CKS2P33552 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CKS2P33552 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CKS2P33552 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC12.21□□□□□ -0.46
CKS2P33552 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CKS2P33552 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
CKS2P33552 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.21□□□□□ -0.46
CKS2P33552 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
CKS2P33552 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CKS2P33552 AC097637.2-201ENST00000624096 1997 ntBASIC12.21□□□□□ -0.46
CKS2P33552 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CKS2P33552 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CKS2P33552 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CKS2P33552 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.21□□□□□ -0.46
CKS2P33552 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CKS2P33552 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
CKS2P33552 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CKS2P33552 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CKS2P33552 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CKS2P33552 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CKS2P33552 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.2□□□□□ -0.46
CKS2P33552 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CKS2P33552 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CKS2P33552 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CKS2P33552 GGT3P-204ENST00000453783 1664 ntBASIC12.2□□□□□ -0.46
CKS2P33552 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CKS2P33552 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CKS2P33552 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC12.2□□□□□ -0.46
CKS2P33552 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CKS2P33552 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CKS2P33552 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CKS2P33552 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
CKS2P33552 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CKS2P33552 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CKS2P33552 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CKS2P33552 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC12.2□□□□□ -0.46
CKS2P33552 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC12.2□□□□□ -0.46
CKS2P33552 CD81-212ENST00000526072 1172 ntTSL 5 BASIC12.2□□□□□ -0.46
CKS2P33552 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CKS2P33552 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC12.2□□□□□ -0.46
CKS2P33552 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC12.2□□□□□ -0.46
CKS2P33552 GPR32P1-201ENST00000601788 811 ntBASIC12.2□□□□□ -0.46
CKS2P33552 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.2□□□□□ -0.46
CKS2P33552 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CKS2P33552 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CKS2P33552 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.2□□□□□ -0.46
CKS2P33552 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CKS2P33552 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CKS2P33552 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
CKS2P33552 AL009178.2-201ENST00000597278 2719 ntBASIC12.2□□□□□ -0.46
CKS2P33552 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.2□□□□□ -0.46
CKS2P33552 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CKS2P33552 AC023157.3-201ENST00000619086 2088 ntBASIC12.2□□□□□ -0.46
CKS2P33552 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC12.2□□□□□ -0.46
CKS2P33552 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
CKS2P33552 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CKS2P33552 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms