Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.69□□□□□ -0.06
HOXC12P31275 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.69□□□□□ -0.06
HOXC12P31275 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
HOXC12P31275 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HOXC12P31275 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HOXC12P31275 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
HOXC12P31275 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HOXC12P31275 AL645608.8-201ENST00000606034 2086 ntBASIC14.69□□□□□ -0.06
HOXC12P31275 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.69□□□□□ -0.06
HOXC12P31275 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HOXC12P31275 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HOXC12P31275 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HOXC12P31275 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.68□□□□□ -0.06
HOXC12P31275 AC063926.2-201ENST00000623766 1308 ntBASIC14.68□□□□□ -0.06
HOXC12P31275 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HOXC12P31275 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HOXC12P31275 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HOXC12P31275 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
HOXC12P31275 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.68□□□□□ -0.06
HOXC12P31275 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HOXC12P31275 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HOXC12P31275 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HOXC12P31275 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HOXC12P31275 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.68□□□□□ -0.06
HOXC12P31275 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HOXC12P31275 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HOXC12P31275 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
HOXC12P31275 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HOXC12P31275 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.68□□□□□ -0.06
HOXC12P31275 AC140658.5-201ENST00000438532 169 ntBASIC14.68□□□□□ -0.06
HOXC12P31275 AC023141.5-201ENST00000458585 616 ntBASIC14.68□□□□□ -0.06
HOXC12P31275 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.68□□□□□ -0.06
HOXC12P31275 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.68□□□□□ -0.06
HOXC12P31275 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.68□□□□□ -0.06
HOXC12P31275 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.68□□□□□ -0.06
HOXC12P31275 DUX4L17-201ENST00000557360 1267 ntBASIC14.68□□□□□ -0.06
HOXC12P31275 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.68□□□□□ -0.06
HOXC12P31275 AJ011932.1-201ENST00000621707 465 ntBASIC14.68□□□□□ -0.06
HOXC12P31275 Z92544.3-201ENST00000624747 417 ntBASIC14.68□□□□□ -0.06
HOXC12P31275 LINC00628-201ENST00000628516 1289 ntBASIC14.68□□□□□ -0.06
HOXC12P31275 AF228730.6-201ENST00000641497 218 ntBASIC14.68□□□□□ -0.06
HOXC12P31275 AC084121.3-201ENST00000641716 218 ntBASIC14.68□□□□□ -0.06
HOXC12P31275 AC105233.6-201ENST00000642093 218 ntBASIC14.68□□□□□ -0.06
HOXC12P31275 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HOXC12P31275 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HOXC12P31275 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HOXC12P31275 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HOXC12P31275 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
HOXC12P31275 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HOXC12P31275 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HOXC12P31275 AC060834.1-201ENST00000443027 2032 ntBASIC14.68□□□□□ -0.06
HOXC12P31275 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
HOXC12P31275 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HOXC12P31275 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HOXC12P31275 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HOXC12P31275 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HOXC12P31275 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HOXC12P31275 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.67□□□□□ -0.06
HOXC12P31275 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HOXC12P31275 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HOXC12P31275 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.67□□□□□ -0.06
HOXC12P31275 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
HOXC12P31275 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.67□□□□□ -0.06
HOXC12P31275 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
HOXC12P31275 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.67□□□□□ -0.06
HOXC12P31275 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.67□□□□□ -0.06
HOXC12P31275 FAM86GP-201ENST00000448322 971 ntBASIC14.67□□□□□ -0.06
HOXC12P31275 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
HOXC12P31275 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HOXC12P31275 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.67□□□□□ -0.06
HOXC12P31275 AC069262.1-201ENST00000539058 672 ntBASIC14.67□□□□□ -0.06
HOXC12P31275 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.67□□□□□ -0.06
HOXC12P31275 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
HOXC12P31275 AC015911.4-201ENST00000588022 1070 ntBASIC14.67□□□□□ -0.06
HOXC12P31275 AC022145.2-201ENST00000598203 171 ntBASIC14.67□□□□□ -0.06
HOXC12P31275 AC021097.1-201ENST00000607902 574 ntBASIC14.67□□□□□ -0.06
HOXC12P31275 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
HOXC12P31275 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.67□□□□□ -0.06
HOXC12P31275 SLC22A20-204ENST00000530038 1673 ntBASIC14.67□□□□□ -0.06
HOXC12P31275 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HOXC12P31275 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HOXC12P31275 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HOXC12P31275 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HOXC12P31275 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HOXC12P31275 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HOXC12P31275 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HOXC12P31275 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.67□□□□□ -0.06
HOXC12P31275 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.67□□□□□ -0.06
HOXC12P31275 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXC12P31275 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXC12P31275 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXC12P31275 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXC12P31275 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXC12P31275 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXC12P31275 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXC12P31275 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXC12P31275 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.66□□□□□ -0.06
HOXC12P31275 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HOXC12P31275 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
HOXC12P31275 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms