Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFSF4P23510 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TNFSF4P23510 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFSF4P23510 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TNFSF4P23510 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TNFSF4P23510 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFSF4P23510 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFSF4P23510 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.15□□□□□ -0.14
TNFSF4P23510 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
TNFSF4P23510 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.15□□□□□ -0.14
TNFSF4P23510 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TNFSF4P23510 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFSF4P23510 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFSF4P23510 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFSF4P23510 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFSF4P23510 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFSF4P23510 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFSF4P23510 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.15□□□□□ -0.14
TNFSF4P23510 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TNFSF4P23510 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.15□□□□□ -0.14
TNFSF4P23510 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFSF4P23510 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFSF4P23510 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.15□□□□□ -0.14
TNFSF4P23510 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFSF4P23510 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.15□□□□□ -0.14
TNFSF4P23510 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFSF4P23510 RPSAP43-201ENST00000402237 625 ntBASIC14.15□□□□□ -0.14
TNFSF4P23510 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.15□□□□□ -0.14
TNFSF4P23510 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TNFSF4P23510 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.15□□□□□ -0.14
TNFSF4P23510 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.15□□□□□ -0.14
TNFSF4P23510 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
TNFSF4P23510 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.15□□□□□ -0.14
TNFSF4P23510 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.15□□□□□ -0.14
TNFSF4P23510 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.15□□□□□ -0.14
TNFSF4P23510 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TNFSF4P23510 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
TNFSF4P23510 RARRES2P8-201ENST00000566335 367 ntBASIC14.15□□□□□ -0.14
TNFSF4P23510 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TNFSF4P23510 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TNFSF4P23510 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.15□□□□□ -0.14
TNFSF4P23510 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.15□□□□□ -0.14
TNFSF4P23510 AC020765.3-201ENST00000613051 740 ntBASIC14.15□□□□□ -0.14
TNFSF4P23510 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.15□□□□□ -0.14
TNFSF4P23510 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFSF4P23510 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFSF4P23510 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFSF4P23510 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFSF4P23510 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFSF4P23510 ELL2P1-201ENST00000413990 1906 ntBASIC14.15□□□□□ -0.14
TNFSF4P23510 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TNFSF4P23510 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFSF4P23510 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.15□□□□□ -0.14
TNFSF4P23510 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFSF4P23510 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TNFSF4P23510 AC092919.2-201ENST00000623631 1645 ntBASIC14.15□□□□□ -0.14
TNFSF4P23510 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFSF4P23510 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TNFSF4P23510 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.15□□□□□ -0.14
TNFSF4P23510 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TNFSF4P23510 WASH6P-202ENST00000359512 1437 ntBASIC14.15□□□□□ -0.14
TNFSF4P23510 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.15□□□□□ -0.14
TNFSF4P23510 AKAP8P1-201ENST00000434743 1349 ntBASIC14.15□□□□□ -0.15
TNFSF4P23510 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
TNFSF4P23510 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
TNFSF4P23510 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.14□□□□□ -0.15
TNFSF4P23510 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFSF4P23510 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TNFSF4P23510 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TNFSF4P23510 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
TNFSF4P23510 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFSF4P23510 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TNFSF4P23510 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFSF4P23510 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.14□□□□□ -0.15
TNFSF4P23510 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
TNFSF4P23510 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFSF4P23510 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFSF4P23510 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFSF4P23510 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TNFSF4P23510 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TNFSF4P23510 AC211486.1-202ENST00000416371 468 ntBASIC14.14□□□□□ -0.15
TNFSF4P23510 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.14□□□□□ -0.15
TNFSF4P23510 AC092474.2-201ENST00000424288 719 ntBASIC14.14□□□□□ -0.15
TNFSF4P23510 AL671277.1-201ENST00000429656 993 ntBASIC14.14□□□□□ -0.15
TNFSF4P23510 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TNFSF4P23510 AC112482.1-201ENST00000492080 688 ntBASIC14.14□□□□□ -0.15
TNFSF4P23510 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TNFSF4P23510 AC211476.1-201ENST00000503899 468 ntBASIC14.14□□□□□ -0.15
TNFSF4P23510 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.14□□□□□ -0.15
TNFSF4P23510 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TNFSF4P23510 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.14□□□□□ -0.15
TNFSF4P23510 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFSF4P23510 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TNFSF4P23510 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.14□□□□□ -0.15
TNFSF4P23510 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFSF4P23510 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
TNFSF4P23510 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
TNFSF4P23510 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.14□□□□□ -0.15
TNFSF4P23510 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TNFSF4P23510 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms