Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NFKB1P19838 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NFKB1P19838 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NFKB1P19838 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.81■□□□□ 0.28
NFKB1P19838 AC140658.5-201ENST00000438532 169 ntBASIC16.81■□□□□ 0.28
NFKB1P19838 KRT18P3-201ENST00000451602 1288 ntBASIC16.81■□□□□ 0.28
NFKB1P19838 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.81■□□□□ 0.28
NFKB1P19838 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.81■□□□□ 0.28
NFKB1P19838 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
NFKB1P19838 AC109635.5-201ENST00000533593 962 ntBASIC16.81■□□□□ 0.28
NFKB1P19838 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.81■□□□□ 0.28
NFKB1P19838 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NFKB1P19838 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NFKB1P19838 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.81■□□□□ 0.28
NFKB1P19838 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.81■□□□□ 0.28
NFKB1P19838 AC027601.4-201ENST00000611259 610 ntBASIC16.81■□□□□ 0.28
NFKB1P19838 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.81■□□□□ 0.28
NFKB1P19838 AC092865.6-201ENST00000642101 219 ntBASIC16.81■□□□□ 0.28
NFKB1P19838 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NFKB1P19838 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.81■□□□□ 0.28
NFKB1P19838 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NFKB1P19838 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
NFKB1P19838 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
NFKB1P19838 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
NFKB1P19838 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
NFKB1P19838 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NFKB1P19838 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
NFKB1P19838 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NFKB1P19838 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.81■□□□□ 0.28
NFKB1P19838 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NFKB1P19838 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NFKB1P19838 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NFKB1P19838 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NFKB1P19838 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.8■□□□□ 0.28
NFKB1P19838 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.8■□□□□ 0.28
NFKB1P19838 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
NFKB1P19838 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.8■□□□□ 0.28
NFKB1P19838 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NFKB1P19838 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NFKB1P19838 REXO1L8P-201ENST00000604378 1897 ntBASIC16.8■□□□□ 0.28
NFKB1P19838 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NFKB1P19838 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
NFKB1P19838 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
NFKB1P19838 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NFKB1P19838 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.8■□□□□ 0.28
NFKB1P19838 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NFKB1P19838 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NFKB1P19838 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NFKB1P19838 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.8■□□□□ 0.28
NFKB1P19838 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NFKB1P19838 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NFKB1P19838 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NFKB1P19838 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NFKB1P19838 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.8■□□□□ 0.28
NFKB1P19838 AL591424.1-201ENST00000442569 1213 ntBASIC16.8■□□□□ 0.28
NFKB1P19838 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.8■□□□□ 0.28
NFKB1P19838 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.8■□□□□ 0.28
NFKB1P19838 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.8■□□□□ 0.28
NFKB1P19838 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NFKB1P19838 PDPK2P-202ENST00000562415 1191 ntBASIC16.8■□□□□ 0.28
NFKB1P19838 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.8■□□□□ 0.28
NFKB1P19838 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.8■□□□□ 0.28
NFKB1P19838 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.8■□□□□ 0.28
NFKB1P19838 FAM197Y3-203ENST00000618346 717 ntBASIC16.8■□□□□ 0.28
NFKB1P19838 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.8■□□□□ 0.28
NFKB1P19838 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NFKB1P19838 AL513523.2-202ENST00000427283 2040 ntBASIC16.8■□□□□ 0.28
NFKB1P19838 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NFKB1P19838 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NFKB1P19838 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.8■□□□□ 0.28
NFKB1P19838 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NFKB1P19838 AC006449.6-201ENST00000612330 2296 ntBASIC16.8■□□□□ 0.28
NFKB1P19838 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NFKB1P19838 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NFKB1P19838 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
NFKB1P19838 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NFKB1P19838 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NFKB1P19838 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NFKB1P19838 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NFKB1P19838 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
NFKB1P19838 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NFKB1P19838 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.79■□□□□ 0.28
NFKB1P19838 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NFKB1P19838 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.79■□□□□ 0.28
NFKB1P19838 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NFKB1P19838 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NFKB1P19838 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NFKB1P19838 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
NFKB1P19838 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NFKB1P19838 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NFKB1P19838 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NFKB1P19838 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NFKB1P19838 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NFKB1P19838 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NFKB1P19838 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NFKB1P19838 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NFKB1P19838 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.79■□□□□ 0.28
NFKB1P19838 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.79■□□□□ 0.28
NFKB1P19838 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NFKB1P19838 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms