Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC3P19447 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC3P19447 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC3P19447 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC3P19447 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.1■□□□□ 0.65
ERCC3P19447 MRPS18AP1-201ENST00000414458 589 ntBASIC19.1■□□□□ 0.65
ERCC3P19447 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.1■□□□□ 0.65
ERCC3P19447 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.1■□□□□ 0.65
ERCC3P19447 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.1■□□□□ 0.65
ERCC3P19447 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC3P19447 AL590560.3-201ENST00000623350 461 ntBASIC19.1■□□□□ 0.65
ERCC3P19447 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC3P19447 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.1■□□□□ 0.65
ERCC3P19447 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC3P19447 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC3P19447 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC3P19447 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ERCC3P19447 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ERCC3P19447 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.1■□□□□ 0.65
ERCC3P19447 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
ERCC3P19447 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
ERCC3P19447 NKILA-202ENST00000614771 2598 ntBASIC19.09■□□□□ 0.65
ERCC3P19447 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ERCC3P19447 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC3P19447 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC3P19447 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.09■□□□□ 0.65
ERCC3P19447 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC3P19447 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC3P19447 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.09■□□□□ 0.65
ERCC3P19447 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.09■□□□□ 0.65
ERCC3P19447 SERBP1P5-201ENST00000510079 1181 ntBASIC19.09■□□□□ 0.65
ERCC3P19447 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.09■□□□□ 0.65
ERCC3P19447 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.09■□□□□ 0.65
ERCC3P19447 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.09■□□□□ 0.65
ERCC3P19447 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC3P19447 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC3P19447 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
ERCC3P19447 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC3P19447 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.09■□□□□ 0.65
ERCC3P19447 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.09■□□□□ 0.65
ERCC3P19447 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ERCC3P19447 OR6D1P-203ENST00000641209 4860 ntBASIC19.09■□□□□ 0.65
ERCC3P19447 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC3P19447 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC3P19447 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.09■□□□□ 0.65
ERCC3P19447 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.09■□□□□ 0.65
ERCC3P19447 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
ERCC3P19447 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ERCC3P19447 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ERCC3P19447 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ERCC3P19447 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ERCC3P19447 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ERCC3P19447 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
ERCC3P19447 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
ERCC3P19447 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ERCC3P19447 AC092053.1-201ENST00000605787 1936 ntBASIC19.08■□□□□ 0.65
ERCC3P19447 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ERCC3P19447 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ERCC3P19447 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.08■□□□□ 0.65
ERCC3P19447 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
ERCC3P19447 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.08■□□□□ 0.65
ERCC3P19447 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC3P19447 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.08■□□□□ 0.64
ERCC3P19447 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC3P19447 TSSK5P-201ENST00000423978 907 ntBASIC19.08■□□□□ 0.64
ERCC3P19447 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.08■□□□□ 0.64
ERCC3P19447 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC3P19447 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC3P19447 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.08■□□□□ 0.64
ERCC3P19447 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.08■□□□□ 0.64
ERCC3P19447 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.08■□□□□ 0.64
ERCC3P19447 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.08■□□□□ 0.64
ERCC3P19447 SPDYE12P-201ENST00000618416 771 ntBASIC19.08■□□□□ 0.64
ERCC3P19447 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
ERCC3P19447 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.08■□□□□ 0.64
ERCC3P19447 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC3P19447 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC3P19447 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC3P19447 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC3P19447 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC3P19447 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC3P19447 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC3P19447 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
ERCC3P19447 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC3P19447 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC3P19447 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.07■□□□□ 0.64
ERCC3P19447 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC3P19447 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC3P19447 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC3P19447 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.07■□□□□ 0.64
ERCC3P19447 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC3P19447 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC3P19447 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC3P19447 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC3P19447 FOXO1B-201ENST00000504678 1527 ntBASIC19.07■□□□□ 0.64
ERCC3P19447 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC3P19447 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.07■□□□□ 0.64
ERCC3P19447 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC3P19447 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ERCC3P19447 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms