Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL11A2P13942 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL11A2P13942 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.81■□□□□ 0.76
COL11A2P13942 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL11A2P13942 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL11A2P13942 OLR1-203ENST00000432556 950 ntTSL 2 BASIC19.81■□□□□ 0.76
COL11A2P13942 FAM86HP-204ENST00000513466 959 ntBASIC19.81■□□□□ 0.76
COL11A2P13942 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC19.81■□□□□ 0.76
COL11A2P13942 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC19.81■□□□□ 0.76
COL11A2P13942 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC19.81■□□□□ 0.76
COL11A2P13942 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC19.81■□□□□ 0.76
COL11A2P13942 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
COL11A2P13942 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
COL11A2P13942 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL11A2P13942 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
COL11A2P13942 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL11A2P13942 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL11A2P13942 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL11A2P13942 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.8■□□□□ 0.76
COL11A2P13942 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
COL11A2P13942 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL11A2P13942 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC19.8■□□□□ 0.76
COL11A2P13942 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL11A2P13942 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC19.8■□□□□ 0.76
COL11A2P13942 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC19.8■□□□□ 0.76
COL11A2P13942 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC19.8■□□□□ 0.76
COL11A2P13942 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC19.8■□□□□ 0.76
COL11A2P13942 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC19.8■□□□□ 0.76
COL11A2P13942 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC19.8■□□□□ 0.76
COL11A2P13942 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
COL11A2P13942 ABBA01031663.1-201ENST00000635630 790 ntBASIC19.8■□□□□ 0.76
COL11A2P13942 RERG-209ENST00000546331 1383 ntTSL 2 BASIC19.8■□□□□ 0.76
COL11A2P13942 KRT8P37-201ENST00000451609 1420 ntBASIC19.8■□□□□ 0.76
COL11A2P13942 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.8■□□□□ 0.76
COL11A2P13942 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC19.8■□□□□ 0.76
COL11A2P13942 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.8■□□□□ 0.76
COL11A2P13942 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.8■□□□□ 0.76
COL11A2P13942 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL11A2P13942 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL11A2P13942 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL11A2P13942 GZMB-202ENST00000382540 816 ntTSL 5 BASIC19.79■□□□□ 0.76
COL11A2P13942 RPL13AP20-201ENST00000459725 609 ntBASIC19.79■□□□□ 0.76
COL11A2P13942 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC19.79■□□□□ 0.76
COL11A2P13942 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC19.79■□□□□ 0.76
COL11A2P13942 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC19.79■□□□□ 0.76
COL11A2P13942 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC19.79■□□□□ 0.76
COL11A2P13942 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL11A2P13942 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL11A2P13942 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL11A2P13942 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.79■□□□□ 0.76
COL11A2P13942 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.79■□□□□ 0.76
COL11A2P13942 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL11A2P13942 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.79■□□□□ 0.76
COL11A2P13942 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL11A2P13942 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL11A2P13942 NEFHP1-201ENST00000412845 2629 ntBASIC19.79■□□□□ 0.76
COL11A2P13942 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
COL11A2P13942 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL11A2P13942 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL11A2P13942 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.79■□□□□ 0.76
COL11A2P13942 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL11A2P13942 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL11A2P13942 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL11A2P13942 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC19.79■□□□□ 0.76
COL11A2P13942 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.79■□□□□ 0.76
COL11A2P13942 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL11A2P13942 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL11A2P13942 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.79■□□□□ 0.76
COL11A2P13942 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.79■□□□□ 0.76
COL11A2P13942 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC19.79■□□□□ 0.76
COL11A2P13942 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC19.79■□□□□ 0.76
COL11A2P13942 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC19.79■□□□□ 0.76
COL11A2P13942 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL11A2P13942 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
COL11A2P13942 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL11A2P13942 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL11A2P13942 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL11A2P13942 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.78■□□□□ 0.76
COL11A2P13942 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.78■□□□□ 0.76
COL11A2P13942 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL11A2P13942 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL11A2P13942 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.78■□□□□ 0.76
COL11A2P13942 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL11A2P13942 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL11A2P13942 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL11A2P13942 TOMM22P5-201ENST00000416399 439 ntBASIC19.78■□□□□ 0.76
COL11A2P13942 AC026954.1-201ENST00000429771 1293 ntBASIC19.78■□□□□ 0.76
COL11A2P13942 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL11A2P13942 RN7SL560P-201ENST00000577943 264 ntBASIC19.78■□□□□ 0.76
COL11A2P13942 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC19.78■□□□□ 0.76
COL11A2P13942 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.78■□□□□ 0.76
COL11A2P13942 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL11A2P13942 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
COL11A2P13942 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL11A2P13942 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
COL11A2P13942 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL11A2P13942 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL11A2P13942 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL11A2P13942 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL11A2P13942 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms