Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BCKDHAP12694 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.81■□□□□ 0.12
BCKDHAP12694 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BCKDHAP12694 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BCKDHAP12694 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
BCKDHAP12694 AC108073.2-201ENST00000464002 357 ntBASIC15.81■□□□□ 0.12
BCKDHAP12694 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BCKDHAP12694 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.81■□□□□ 0.12
BCKDHAP12694 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.81■□□□□ 0.12
BCKDHAP12694 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.81■□□□□ 0.12
BCKDHAP12694 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.81■□□□□ 0.12
BCKDHAP12694 AL121912.1-201ENST00000603683 238 ntBASIC15.81■□□□□ 0.12
BCKDHAP12694 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.81■□□□□ 0.12
BCKDHAP12694 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.81■□□□□ 0.12
BCKDHAP12694 AC004790.2-201ENST00000623588 572 ntBASIC15.81■□□□□ 0.12
BCKDHAP12694 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BCKDHAP12694 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BCKDHAP12694 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BCKDHAP12694 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BCKDHAP12694 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BCKDHAP12694 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
BCKDHAP12694 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BCKDHAP12694 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
BCKDHAP12694 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
BCKDHAP12694 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
BCKDHAP12694 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BCKDHAP12694 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
BCKDHAP12694 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.8■□□□□ 0.12
BCKDHAP12694 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BCKDHAP12694 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
BCKDHAP12694 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BCKDHAP12694 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BCKDHAP12694 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.8■□□□□ 0.12
BCKDHAP12694 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BCKDHAP12694 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BCKDHAP12694 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BCKDHAP12694 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
BCKDHAP12694 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BCKDHAP12694 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.8■□□□□ 0.12
BCKDHAP12694 KRT18P67-201ENST00000432816 1264 ntBASIC15.8■□□□□ 0.12
BCKDHAP12694 AF186996.4-201ENST00000467186 377 ntBASIC15.8■□□□□ 0.12
BCKDHAP12694 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.8■□□□□ 0.12
BCKDHAP12694 ACTL9-202ENST00000612068 1252 ntBASIC15.8■□□□□ 0.12
BCKDHAP12694 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BCKDHAP12694 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BCKDHAP12694 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.8■□□□□ 0.12
BCKDHAP12694 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BCKDHAP12694 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BCKDHAP12694 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BCKDHAP12694 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
BCKDHAP12694 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
BCKDHAP12694 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.8■□□□□ 0.12
BCKDHAP12694 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BCKDHAP12694 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BCKDHAP12694 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
BCKDHAP12694 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
BCKDHAP12694 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
BCKDHAP12694 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
BCKDHAP12694 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
BCKDHAP12694 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.79■□□□□ 0.12
BCKDHAP12694 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
BCKDHAP12694 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
BCKDHAP12694 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHAP12694 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHAP12694 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHAP12694 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
BCKDHAP12694 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHAP12694 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHAP12694 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHAP12694 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHAP12694 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.79■□□□□ 0.12
BCKDHAP12694 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.79■□□□□ 0.12
BCKDHAP12694 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.79■□□□□ 0.12
BCKDHAP12694 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHAP12694 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHAP12694 FAM185BP-201ENST00000443595 716 ntBASIC15.79■□□□□ 0.12
BCKDHAP12694 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.79■□□□□ 0.12
BCKDHAP12694 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHAP12694 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.79■□□□□ 0.12
BCKDHAP12694 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.79■□□□□ 0.12
BCKDHAP12694 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHAP12694 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.79■□□□□ 0.12
BCKDHAP12694 AC148477.8-201ENST00000624298 468 ntBASIC15.79■□□□□ 0.12
BCKDHAP12694 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.79■□□□□ 0.12
BCKDHAP12694 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHAP12694 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
BCKDHAP12694 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHAP12694 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHAP12694 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHAP12694 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHAP12694 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHAP12694 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.79■□□□□ 0.12
BCKDHAP12694 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.79■□□□□ 0.12
BCKDHAP12694 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.79■□□□□ 0.12
BCKDHAP12694 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHAP12694 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHAP12694 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
BCKDHAP12694 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
BCKDHAP12694 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.79■□□□□ 0.12
BCKDHAP12694 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms