Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD28P10747 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD28P10747 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC12.92□□□□□ -0.34
CD28P10747 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CD28P10747 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.92□□□□□ -0.34
CD28P10747 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.92□□□□□ -0.34
CD28P10747 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC12.92□□□□□ -0.34
CD28P10747 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.92□□□□□ -0.34
CD28P10747 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.92□□□□□ -0.34
CD28P10747 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CD28P10747 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CD28P10747 AC105233.2-201ENST00000523697 349 ntBASIC12.92□□□□□ -0.34
CD28P10747 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC12.92□□□□□ -0.34
CD28P10747 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.92□□□□□ -0.34
CD28P10747 AF228730.5-201ENST00000530288 346 ntBASIC12.92□□□□□ -0.34
CD28P10747 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC12.92□□□□□ -0.34
CD28P10747 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CD28P10747 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC12.92□□□□□ -0.34
CD28P10747 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CD28P10747 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.92□□□□□ -0.34
CD28P10747 AL158211.3-201ENST00000607385 239 ntBASIC12.92□□□□□ -0.34
CD28P10747 AC003101.2-201ENST00000612557 442 ntBASIC12.92□□□□□ -0.34
CD28P10747 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CD28P10747 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD28P10747 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD28P10747 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD28P10747 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD28P10747 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC12.92□□□□□ -0.34
CD28P10747 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CD28P10747 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CD28P10747 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD28P10747 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CD28P10747 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CD28P10747 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC12.92□□□□□ -0.34
CD28P10747 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CD28P10747 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CD28P10747 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CD28P10747 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CD28P10747 RHBDF1P1-201ENST00000427504 1941 ntBASIC12.92□□□□□ -0.34
CD28P10747 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
CD28P10747 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD28P10747 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD28P10747 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CD28P10747 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD28P10747 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD28P10747 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD28P10747 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CD28P10747 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD28P10747 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CD28P10747 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CD28P10747 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.91□□□□□ -0.34
CD28P10747 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD28P10747 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.91□□□□□ -0.34
CD28P10747 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
CD28P10747 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.91□□□□□ -0.34
CD28P10747 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.91□□□□□ -0.34
CD28P10747 AC002472.2-201ENST00000442739 958 ntBASIC12.91□□□□□ -0.34
CD28P10747 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.91□□□□□ -0.34
CD28P10747 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC12.91□□□□□ -0.34
CD28P10747 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CD28P10747 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.91□□□□□ -0.34
CD28P10747 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.91□□□□□ -0.34
CD28P10747 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC12.91□□□□□ -0.34
CD28P10747 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.91□□□□□ -0.34
CD28P10747 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD28P10747 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC12.91□□□□□ -0.34
CD28P10747 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CD28P10747 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD28P10747 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD28P10747 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC12.91□□□□□ -0.34
CD28P10747 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC12.91□□□□□ -0.34
CD28P10747 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC12.91□□□□□ -0.34
CD28P10747 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
CD28P10747 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC12.91□□□□□ -0.34
CD28P10747 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD28P10747 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD28P10747 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC12.91□□□□□ -0.34
CD28P10747 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD28P10747 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD28P10747 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CD28P10747 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CD28P10747 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CD28P10747 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD28P10747 AP3S2-216ENST00000617003 1561 ntBASIC12.9□□□□□ -0.34
CD28P10747 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CD28P10747 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD28P10747 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD28P10747 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD28P10747 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD28P10747 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CD28P10747 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CD28P10747 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.9□□□□□ -0.34
CD28P10747 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD28P10747 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD28P10747 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC12.9□□□□□ -0.34
CD28P10747 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD28P10747 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD28P10747 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD28P10747 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CD28P10747 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms