Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FREM3P0C091 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
FREM3P0C091 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
FREM3P0C091 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FREM3P0C091 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
FREM3P0C091 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FREM3P0C091 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FREM3P0C091 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.97□□□□□ -0.01
FREM3P0C091 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
FREM3P0C091 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
FREM3P0C091 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FREM3P0C091 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FREM3P0C091 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FREM3P0C091 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FREM3P0C091 LINC02199-201ENST00000506655 2702 ntBASIC14.97□□□□□ -0.01
FREM3P0C091 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FREM3P0C091 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FREM3P0C091 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
FREM3P0C091 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
FREM3P0C091 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
FREM3P0C091 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FREM3P0C091 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FREM3P0C091 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FREM3P0C091 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.97□□□□□ -0.01
FREM3P0C091 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FREM3P0C091 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.97□□□□□ -0.01
FREM3P0C091 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.97□□□□□ -0.01
FREM3P0C091 AC079781.4-201ENST00000641908 219 ntBASIC14.97□□□□□ -0.01
FREM3P0C091 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FREM3P0C091 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FREM3P0C091 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FREM3P0C091 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.97□□□□□ -0.01
FREM3P0C091 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.97□□□□□ -0.01
FREM3P0C091 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
FREM3P0C091 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FREM3P0C091 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
FREM3P0C091 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
FREM3P0C091 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
FREM3P0C091 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
FREM3P0C091 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.97□□□□□ -0.01
FREM3P0C091 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
FREM3P0C091 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
FREM3P0C091 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
FREM3P0C091 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
FREM3P0C091 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FREM3P0C091 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.96□□□□□ -0.01
FREM3P0C091 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.96□□□□□ -0.01
FREM3P0C091 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.96□□□□□ -0.01
FREM3P0C091 CYMP-203ENST00000474680 1263 ntBASIC14.96□□□□□ -0.01
FREM3P0C091 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.96□□□□□ -0.01
FREM3P0C091 AC067863.1-201ENST00000494933 530 ntBASIC14.96□□□□□ -0.01
FREM3P0C091 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.96□□□□□ -0.01
FREM3P0C091 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.96□□□□□ -0.01
FREM3P0C091 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.96□□□□□ -0.01
FREM3P0C091 AC073389.1-201ENST00000595595 795 ntBASIC14.96□□□□□ -0.01
FREM3P0C091 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.96□□□□□ -0.01
FREM3P0C091 AC084121.4-201ENST00000641598 221 ntBASIC14.96□□□□□ -0.01
FREM3P0C091 AF228730.8-201ENST00000642140 221 ntBASIC14.96□□□□□ -0.01
FREM3P0C091 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.96□□□□□ -0.01
FREM3P0C091 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FREM3P0C091 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
FREM3P0C091 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
FREM3P0C091 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FREM3P0C091 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
FREM3P0C091 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
FREM3P0C091 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
FREM3P0C091 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.96□□□□□ -0.01
FREM3P0C091 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FREM3P0C091 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FREM3P0C091 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.96□□□□□ -0.01
FREM3P0C091 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FREM3P0C091 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FREM3P0C091 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
FREM3P0C091 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
FREM3P0C091 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.96□□□□□ -0.01
FREM3P0C091 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
FREM3P0C091 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.96□□□□□ -0.01
FREM3P0C091 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.96□□□□□ -0.01
FREM3P0C091 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
FREM3P0C091 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
FREM3P0C091 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
FREM3P0C091 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FREM3P0C091 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FREM3P0C091 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
FREM3P0C091 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FREM3P0C091 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.96□□□□□ -0.01
FREM3P0C091 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.96□□□□□ -0.01
FREM3P0C091 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
FREM3P0C091 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.96□□□□□ -0.01
FREM3P0C091 AC051619.7-201ENST00000568314 623 ntBASIC14.96□□□□□ -0.01
FREM3P0C091 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.96□□□□□ -0.01
FREM3P0C091 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.96□□□□□ -0.01
FREM3P0C091 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
FREM3P0C091 AL139011.1-202ENST00000642063 584 ntBASIC14.96□□□□□ -0.01
FREM3P0C091 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
FREM3P0C091 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.96□□□□□ -0.01
FREM3P0C091 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
FREM3P0C091 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.96□□□□□ -0.02
FREM3P0C091 PCGF3-213ENST00000620529 1899 ntBASIC14.96□□□□□ -0.02
FREM3P0C091 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms