Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.45□□□□□ -0.1
SFTPBP07988 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SFTPBP07988 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SFTPBP07988 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SFTPBP07988 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.45□□□□□ -0.1
SFTPBP07988 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
SFTPBP07988 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SFTPBP07988 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
SFTPBP07988 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SFTPBP07988 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SFTPBP07988 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.45□□□□□ -0.1
SFTPBP07988 AP002414.1-201ENST00000391405 1147 ntBASIC14.45□□□□□ -0.1
SFTPBP07988 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SFTPBP07988 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SFTPBP07988 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SFTPBP07988 AP000347.1-202ENST00000435868 847 ntBASIC14.45□□□□□ -0.1
SFTPBP07988 AL391256.1-201ENST00000443260 1855 ntBASIC14.45□□□□□ -0.1
SFTPBP07988 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.45□□□□□ -0.1
SFTPBP07988 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.45□□□□□ -0.1
SFTPBP07988 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SFTPBP07988 AP002490.2-201ENST00000524791 560 ntBASIC14.45□□□□□ -0.1
SFTPBP07988 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.45□□□□□ -0.1
SFTPBP07988 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.45□□□□□ -0.1
SFTPBP07988 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SFTPBP07988 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.45□□□□□ -0.1
SFTPBP07988 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
SFTPBP07988 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SFTPBP07988 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.45□□□□□ -0.1
SFTPBP07988 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SFTPBP07988 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SFTPBP07988 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SFTPBP07988 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.45□□□□□ -0.1
SFTPBP07988 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SFTPBP07988 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SFTPBP07988 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SFTPBP07988 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SFTPBP07988 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SFTPBP07988 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFTPBP07988 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.44□□□□□ -0.1
SFTPBP07988 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SFTPBP07988 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SFTPBP07988 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFTPBP07988 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.44□□□□□ -0.1
SFTPBP07988 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFTPBP07988 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFTPBP07988 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFTPBP07988 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.44□□□□□ -0.1
SFTPBP07988 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.44□□□□□ -0.1
SFTPBP07988 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.44□□□□□ -0.1
SFTPBP07988 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SFTPBP07988 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFTPBP07988 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFTPBP07988 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFTPBP07988 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFTPBP07988 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SFTPBP07988 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SFTPBP07988 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.44□□□□□ -0.1
SFTPBP07988 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.44□□□□□ -0.1
SFTPBP07988 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.44□□□□□ -0.1
SFTPBP07988 AL031284.1-201ENST00000419297 478 ntBASIC14.44□□□□□ -0.1
SFTPBP07988 AC018712.1-201ENST00000455767 687 ntBASIC14.44□□□□□ -0.1
SFTPBP07988 BX005266.1-201ENST00000473402 457 ntBASIC14.44□□□□□ -0.1
SFTPBP07988 RNA5SP419-201ENST00000515908 135 ntBASIC14.44□□□□□ -0.1
SFTPBP07988 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
SFTPBP07988 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFTPBP07988 AC021087.4-201ENST00000563761 564 ntBASIC14.44□□□□□ -0.1
SFTPBP07988 NKAPP1-205ENST00000585790 367 ntBASIC14.44□□□□□ -0.1
SFTPBP07988 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.44□□□□□ -0.1
SFTPBP07988 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.44□□□□□ -0.1
SFTPBP07988 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFTPBP07988 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SFTPBP07988 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.44□□□□□ -0.1
SFTPBP07988 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SFTPBP07988 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFTPBP07988 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SFTPBP07988 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SFTPBP07988 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SFTPBP07988 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFTPBP07988 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.44□□□□□ -0.1
SFTPBP07988 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFTPBP07988 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
SFTPBP07988 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.44□□□□□ -0.1
SFTPBP07988 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SFTPBP07988 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFTPBP07988 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SFTPBP07988 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.44□□□□□ -0.1
SFTPBP07988 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SFTPBP07988 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SFTPBP07988 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SFTPBP07988 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SFTPBP07988 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SFTPBP07988 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.43□□□□□ -0.1
SFTPBP07988 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SFTPBP07988 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SFTPBP07988 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.43□□□□□ -0.1
SFTPBP07988 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SFTPBP07988 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.43□□□□□ -0.1
SFTPBP07988 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.43□□□□□ -0.1
SFTPBP07988 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
SFTPBP07988 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms