Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RETP07949 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RETP07949 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RETP07949 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.62■□□□□ 0.25
RETP07949 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RETP07949 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RETP07949 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RETP07949 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RETP07949 MIR658-201ENST00000385210 100 ntBASIC16.62■□□□□ 0.25
RETP07949 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RETP07949 AC079776.1-201ENST00000401540 1152 ntBASIC16.62■□□□□ 0.25
RETP07949 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.62■□□□□ 0.25
RETP07949 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.62■□□□□ 0.25
RETP07949 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RETP07949 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RETP07949 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
RETP07949 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
RETP07949 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.62■□□□□ 0.25
RETP07949 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.62■□□□□ 0.25
RETP07949 AL031055.1-201ENST00000606362 631 ntBASIC16.62■□□□□ 0.25
RETP07949 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.62■□□□□ 0.25
RETP07949 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.62■□□□□ 0.25
RETP07949 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RETP07949 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RETP07949 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RETP07949 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.62■□□□□ 0.25
RETP07949 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RETP07949 AC087499.5-201ENST00000452760 1342 ntBASIC16.62■□□□□ 0.25
RETP07949 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RETP07949 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RETP07949 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RETP07949 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RETP07949 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.62■□□□□ 0.25
RETP07949 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
RETP07949 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RETP07949 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RETP07949 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RETP07949 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RETP07949 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RETP07949 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
RETP07949 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RETP07949 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.61■□□□□ 0.25
RETP07949 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RETP07949 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RETP07949 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RETP07949 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RETP07949 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RETP07949 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RETP07949 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RETP07949 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.61■□□□□ 0.25
RETP07949 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RETP07949 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RETP07949 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RETP07949 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RETP07949 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
RETP07949 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
RETP07949 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RETP07949 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RETP07949 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RETP07949 RNU1-129P-201ENST00000384064 167 ntBASIC16.61■□□□□ 0.25
RETP07949 DGCR5-201ENST00000399539 862 ntBASIC16.61■□□□□ 0.25
RETP07949 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.61■□□□□ 0.25
RETP07949 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RETP07949 AC087499.6-201ENST00000411576 835 ntBASIC16.61■□□□□ 0.25
RETP07949 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RETP07949 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.61■□□□□ 0.25
RETP07949 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.61■□□□□ 0.25
RETP07949 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.61■□□□□ 0.25
RETP07949 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.61■□□□□ 0.25
RETP07949 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.61■□□□□ 0.25
RETP07949 RAB43P1-201ENST00000561790 589 ntBASIC16.61■□□□□ 0.25
RETP07949 AC009407.1-201ENST00000568958 598 ntBASIC16.61■□□□□ 0.25
RETP07949 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.61■□□□□ 0.25
RETP07949 U1.21-201ENST00000580816 167 ntBASIC16.61■□□□□ 0.25
RETP07949 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.61■□□□□ 0.25
RETP07949 AC008738.7-201ENST00000609744 511 ntBASIC16.61■□□□□ 0.25
RETP07949 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RETP07949 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RETP07949 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
RETP07949 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RETP07949 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.61■□□□□ 0.25
RETP07949 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RETP07949 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RETP07949 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RETP07949 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RETP07949 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.61■□□□□ 0.25
RETP07949 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RETP07949 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RETP07949 AL035456.1-201ENST00000456064 1369 ntBASIC16.61■□□□□ 0.25
RETP07949 AL391825.1-201ENST00000457671 1364 ntBASIC16.61■□□□□ 0.25
RETP07949 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RETP07949 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RETP07949 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RETP07949 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.61■□□□□ 0.25
RETP07949 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RETP07949 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RETP07949 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RETP07949 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RETP07949 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RETP07949 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms