Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHGBP05060 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.78■□□□□ 0.76
CHGBP05060 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHGBP05060 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
CHGBP05060 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CHGBP05060 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CHGBP05060 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHGBP05060 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHGBP05060 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHGBP05060 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHGBP05060 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHGBP05060 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHGBP05060 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.77■□□□□ 0.76
CHGBP05060 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.77■□□□□ 0.76
CHGBP05060 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHGBP05060 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CHGBP05060 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHGBP05060 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHGBP05060 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CHGBP05060 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHGBP05060 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CHGBP05060 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.77■□□□□ 0.76
CHGBP05060 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.77■□□□□ 0.76
CHGBP05060 AC105233.2-201ENST00000523697 349 ntBASIC19.77■□□□□ 0.76
CHGBP05060 AF228730.5-201ENST00000530288 346 ntBASIC19.77■□□□□ 0.76
CHGBP05060 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.77■□□□□ 0.76
CHGBP05060 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.77■□□□□ 0.76
CHGBP05060 KRT8P23-201ENST00000560090 1207 ntBASIC19.77■□□□□ 0.76
CHGBP05060 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.77■□□□□ 0.76
CHGBP05060 AC020765.3-201ENST00000613051 740 ntBASIC19.77■□□□□ 0.76
CHGBP05060 Z92544.3-201ENST00000624747 417 ntBASIC19.77■□□□□ 0.76
CHGBP05060 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.77■□□□□ 0.76
CHGBP05060 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHGBP05060 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.77■□□□□ 0.76
CHGBP05060 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.77■□□□□ 0.76
CHGBP05060 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.77■□□□□ 0.76
CHGBP05060 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.77■□□□□ 0.76
CHGBP05060 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHGBP05060 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.77■□□□□ 0.75
CHGBP05060 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.77■□□□□ 0.75
CHGBP05060 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHGBP05060 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHGBP05060 AL589702.1-201ENST00000641229 1509 ntBASIC19.76■□□□□ 0.75
CHGBP05060 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHGBP05060 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.76■□□□□ 0.75
CHGBP05060 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHGBP05060 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHGBP05060 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHGBP05060 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHGBP05060 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHGBP05060 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CHGBP05060 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHGBP05060 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHGBP05060 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHGBP05060 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.76■□□□□ 0.75
CHGBP05060 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.76■□□□□ 0.75
CHGBP05060 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.76■□□□□ 0.75
CHGBP05060 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHGBP05060 ALG1L8P-201ENST00000533887 760 ntBASIC19.76■□□□□ 0.75
CHGBP05060 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CHGBP05060 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CHGBP05060 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
CHGBP05060 AC027796.2-201ENST00000575326 344 ntBASIC19.76■□□□□ 0.75
CHGBP05060 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.76■□□□□ 0.75
CHGBP05060 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.76■□□□□ 0.75
CHGBP05060 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CHGBP05060 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.76■□□□□ 0.75
CHGBP05060 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.76■□□□□ 0.75
CHGBP05060 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHGBP05060 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.76■□□□□ 0.75
CHGBP05060 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHGBP05060 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHGBP05060 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHGBP05060 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHGBP05060 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHGBP05060 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHGBP05060 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHGBP05060 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CHGBP05060 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHGBP05060 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.75■□□□□ 0.75
CHGBP05060 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CHGBP05060 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHGBP05060 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHGBP05060 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHGBP05060 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHGBP05060 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CHGBP05060 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.75■□□□□ 0.75
CHGBP05060 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.75■□□□□ 0.75
CHGBP05060 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHGBP05060 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.75■□□□□ 0.75
CHGBP05060 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHGBP05060 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.75■□□□□ 0.75
CHGBP05060 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHGBP05060 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.75■□□□□ 0.75
CHGBP05060 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHGBP05060 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHGBP05060 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHGBP05060 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.75■□□□□ 0.75
CHGBP05060 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.74■□□□□ 0.75
CHGBP05060 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms