Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TCRAP04437 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRAP04437 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.62□□□□□ -0.39
TCRAP04437 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TCRAP04437 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRAP04437 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TCRAP04437 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
TCRAP04437 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRAP04437 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TCRAP04437 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRAP04437 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC12.62□□□□□ -0.39
TCRAP04437 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRAP04437 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TCRAP04437 FUOM-202ENST00000368551 628 ntTSL 3 BASIC12.62□□□□□ -0.39
TCRAP04437 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
TCRAP04437 CHCHD2P8-201ENST00000429873 447 ntBASIC12.62□□□□□ -0.39
TCRAP04437 DAP-202ENST00000432074 1048 ntTSL 2 BASIC12.62□□□□□ -0.39
TCRAP04437 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TCRAP04437 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC12.62□□□□□ -0.39
TCRAP04437 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC12.62□□□□□ -0.39
TCRAP04437 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC12.62□□□□□ -0.39
TCRAP04437 AC096582.2-201ENST00000510860 516 ntBASIC12.62□□□□□ -0.39
TCRAP04437 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC12.62□□□□□ -0.39
TCRAP04437 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC12.62□□□□□ -0.39
TCRAP04437 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC12.62□□□□□ -0.39
TCRAP04437 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.62□□□□□ -0.39
TCRAP04437 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC12.62□□□□□ -0.39
TCRAP04437 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC12.62□□□□□ -0.39
TCRAP04437 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRAP04437 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRAP04437 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRAP04437 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.62□□□□□ -0.39
TCRAP04437 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRAP04437 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRAP04437 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC12.62□□□□□ -0.39
TCRAP04437 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRAP04437 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRAP04437 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC12.62□□□□□ -0.39
TCRAP04437 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TCRAP04437 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC12.62□□□□□ -0.39
TCRAP04437 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TCRAP04437 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.62□□□□□ -0.39
TCRAP04437 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TCRAP04437 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRAP04437 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TCRAP04437 GPAA1P2-202ENST00000606848 1787 ntBASIC12.61□□□□□ -0.39
TCRAP04437 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.61□□□□□ -0.39
TCRAP04437 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC12.61□□□□□ -0.39
TCRAP04437 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC12.61□□□□□ -0.39
TCRAP04437 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TCRAP04437 AC006058.4-201ENST00000624016 1670 ntBASIC12.61□□□□□ -0.39
TCRAP04437 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRAP04437 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.61□□□□□ -0.39
TCRAP04437 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRAP04437 BID-213ENST00000615414 2236 ntTSL 5 BASIC12.61□□□□□ -0.39
TCRAP04437 AC013268.4-201ENST00000637413 2228 ntBASIC12.61□□□□□ -0.39
TCRAP04437 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC12.61□□□□□ -0.39
TCRAP04437 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TCRAP04437 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TCRAP04437 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRAP04437 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.61□□□□□ -0.39
TCRAP04437 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC12.61□□□□□ -0.39
TCRAP04437 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TCRAP04437 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TCRAP04437 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.61□□□□□ -0.39
TCRAP04437 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRAP04437 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TCRAP04437 SOD2-201ENST00000337404 991 ntTSL 2 BASIC12.61□□□□□ -0.39
TCRAP04437 RCN1P2-201ENST00000398357 915 ntBASIC12.61□□□□□ -0.39
TCRAP04437 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TCRAP04437 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC12.61□□□□□ -0.39
TCRAP04437 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC12.61□□□□□ -0.39
TCRAP04437 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC12.61□□□□□ -0.39
TCRAP04437 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
TCRAP04437 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC12.61□□□□□ -0.39
TCRAP04437 MIR4492-201ENST00000581627 80 ntBASIC12.61□□□□□ -0.39
TCRAP04437 MPDU1-223ENST00000582151 728 ntBASIC12.61□□□□□ -0.39
TCRAP04437 Z69720.1-201ENST00000601483 472 ntBASIC12.61□□□□□ -0.39
TCRAP04437 AL353135.1-201ENST00000606729 504 ntBASIC12.61□□□□□ -0.39
TCRAP04437 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRAP04437 AC010331.1-201ENST00000611423 582 ntBASIC12.61□□□□□ -0.39
TCRAP04437 AC073592.4-201ENST00000623827 446 ntBASIC12.61□□□□□ -0.39
TCRAP04437 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC12.61□□□□□ -0.39
TCRAP04437 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC12.61□□□□□ -0.39
TCRAP04437 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRAP04437 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TCRAP04437 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRAP04437 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRAP04437 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
TCRAP04437 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.61□□□□□ -0.39
TCRAP04437 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRAP04437 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRAP04437 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRAP04437 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRAP04437 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRAP04437 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TCRAP04437 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TCRAP04437 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TCRAP04437 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TCRAP04437 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms