Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 PAWRP1-201ENST00000451083 565 ntBASIC14.9□□□□□ -0.02
HLA-DQA2P01906 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 AC006557.2-201ENST00000592985 1240 ntBASIC14.9□□□□□ -0.02
HLA-DQA2P01906 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 ME2P1-201ENST00000426028 1970 ntBASIC14.9□□□□□ -0.02
HLA-DQA2P01906 AL671710.1-201ENST00000610245 2349 ntBASIC14.9□□□□□ -0.02
HLA-DQA2P01906 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DQA2P01906 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 AC006504.4-201ENST00000592118 1568 ntBASIC14.89□□□□□ -0.03
HLA-DQA2P01906 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
HLA-DQA2P01906 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 PCDHA3-202ENST00000532566 4594 ntBASIC14.88□□□□□ -0.03
HLA-DQA2P01906 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 AC002310.6-201ENST00000624451 1377 ntBASIC14.88□□□□□ -0.03
HLA-DQA2P01906 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 ELK2BP-201ENST00000415014 1224 ntBASIC14.88□□□□□ -0.03
HLA-DQA2P01906 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms