Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DRAP01903 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DRAP01903 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DRAP01903 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DRAP01903 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.73■□□□□ 0.43
HLA-DRAP01903 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DRAP01903 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HLA-DRAP01903 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.73■□□□□ 0.43
HLA-DRAP01903 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.73■□□□□ 0.43
HLA-DRAP01903 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DRAP01903 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DRAP01903 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DRAP01903 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DRAP01903 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DRAP01903 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.73■□□□□ 0.43
HLA-DRAP01903 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
HLA-DRAP01903 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
HLA-DRAP01903 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.73■□□□□ 0.43
HLA-DRAP01903 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.73■□□□□ 0.43
HLA-DRAP01903 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.73■□□□□ 0.43
HLA-DRAP01903 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.73■□□□□ 0.43
HLA-DRAP01903 YBX1P5-201ENST00000509441 847 ntBASIC17.73■□□□□ 0.43
HLA-DRAP01903 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.73■□□□□ 0.43
HLA-DRAP01903 AC243562.1-201ENST00000560672 389 ntBASIC17.73■□□□□ 0.43
HLA-DRAP01903 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.73■□□□□ 0.43
HLA-DRAP01903 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.73■□□□□ 0.43
HLA-DRAP01903 MIR3687-2-201ENST00000577708 61 ntBASIC17.73■□□□□ 0.43
HLA-DRAP01903 MIR4469-201ENST00000583919 79 ntBASIC17.73■□□□□ 0.43
HLA-DRAP01903 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.73■□□□□ 0.43
HLA-DRAP01903 AC026120.1-201ENST00000611536 926 ntBASIC17.73■□□□□ 0.43
HLA-DRAP01903 MIR3687-1-201ENST00000614492 61 ntBASIC17.73■□□□□ 0.43
HLA-DRAP01903 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.73■□□□□ 0.43
HLA-DRAP01903 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DRAP01903 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DRAP01903 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DRAP01903 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DRAP01903 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.73■□□□□ 0.43
HLA-DRAP01903 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DRAP01903 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DRAP01903 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DRAP01903 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DRAP01903 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DRAP01903 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.73■□□□□ 0.43
HLA-DRAP01903 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DRAP01903 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DRAP01903 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DRAP01903 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HLA-DRAP01903 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HLA-DRAP01903 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DRAP01903 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.72■□□□□ 0.43
HLA-DRAP01903 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
HLA-DRAP01903 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DRAP01903 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DRAP01903 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.72■□□□□ 0.43
HLA-DRAP01903 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DRAP01903 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.72■□□□□ 0.43
HLA-DRAP01903 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
HLA-DRAP01903 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DRAP01903 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.72■□□□□ 0.43
HLA-DRAP01903 REXO1L8P-201ENST00000604378 1897 ntBASIC17.72■□□□□ 0.43
HLA-DRAP01903 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
HLA-DRAP01903 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
HLA-DRAP01903 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DRAP01903 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DRAP01903 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DRAP01903 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.72■□□□□ 0.43
HLA-DRAP01903 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.72■□□□□ 0.43
HLA-DRAP01903 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.72■□□□□ 0.43
HLA-DRAP01903 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.72■□□□□ 0.43
HLA-DRAP01903 SPDYE11-202ENST00000450699 704 ntBASIC17.72■□□□□ 0.43
HLA-DRAP01903 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HLA-DRAP01903 TIMM8BP1-201ENST00000452384 211 ntBASIC17.72■□□□□ 0.43
HLA-DRAP01903 PRYP6-201ENST00000514804 343 ntBASIC17.72■□□□□ 0.43
HLA-DRAP01903 SPDYE9P-201ENST00000570642 692 ntBASIC17.72■□□□□ 0.43
HLA-DRAP01903 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.72■□□□□ 0.43
HLA-DRAP01903 SPDYE10P-202ENST00000612005 668 ntBASIC17.72■□□□□ 0.43
HLA-DRAP01903 SPDYE8P-202ENST00000612377 668 ntBASIC17.72■□□□□ 0.43
HLA-DRAP01903 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.72■□□□□ 0.43
HLA-DRAP01903 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DRAP01903 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DRAP01903 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DRAP01903 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DRAP01903 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
HLA-DRAP01903 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DRAP01903 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DRAP01903 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DRAP01903 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
HLA-DRAP01903 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DRAP01903 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.72■□□□□ 0.43
HLA-DRAP01903 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.72■□□□□ 0.43
HLA-DRAP01903 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DRAP01903 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DRAP01903 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HLA-DRAP01903 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DRAP01903 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DRAP01903 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
HLA-DRAP01903 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HLA-DRAP01903 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.71■□□□□ 0.43
HLA-DRAP01903 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HLA-DRAP01903 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms