Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
MBD4O95243 SPDYE7P-202ENST00000420373 878 ntBASIC19.64■□□□□ 0.73
MBD4O95243 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.64■□□□□ 0.73
MBD4O95243 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD4O95243 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.64■□□□□ 0.73
MBD4O95243 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.64■□□□□ 0.73
MBD4O95243 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MBD4O95243 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.64■□□□□ 0.73
MBD4O95243 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD4O95243 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MBD4O95243 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD4O95243 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.64■□□□□ 0.73
MBD4O95243 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD4O95243 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MBD4O95243 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.64■□□□□ 0.73
MBD4O95243 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD4O95243 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.64■□□□□ 0.73
MBD4O95243 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.64■□□□□ 0.73
MBD4O95243 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
MBD4O95243 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD4O95243 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.64■□□□□ 0.73
MBD4O95243 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD4O95243 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MBD4O95243 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MBD4O95243 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.63■□□□□ 0.73
MBD4O95243 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.63■□□□□ 0.73
MBD4O95243 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MBD4O95243 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MBD4O95243 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
MBD4O95243 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.63■□□□□ 0.73
MBD4O95243 AC020916.1-201ENST00000587762 1774 ntBASIC19.63■□□□□ 0.73
MBD4O95243 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD4O95243 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
MBD4O95243 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.63■□□□□ 0.73
MBD4O95243 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD4O95243 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
MBD4O95243 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD4O95243 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
MBD4O95243 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD4O95243 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.63■□□□□ 0.73
MBD4O95243 RNA5SP410-201ENST00000516285 106 ntBASIC19.63■□□□□ 0.73
MBD4O95243 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.63■□□□□ 0.73
MBD4O95243 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MBD4O95243 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.63■□□□□ 0.73
MBD4O95243 DUX4L27-201ENST00000554796 1261 ntBASIC19.63■□□□□ 0.73
MBD4O95243 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.63■□□□□ 0.73
MBD4O95243 AC018529.1-201ENST00000613063 361 ntBASIC19.63■□□□□ 0.73
MBD4O95243 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
MBD4O95243 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MBD4O95243 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD4O95243 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD4O95243 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
MBD4O95243 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MBD4O95243 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD4O95243 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
MBD4O95243 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD4O95243 AC079328.2-201ENST00000561241 3354 ntBASIC19.63■□□□□ 0.73
MBD4O95243 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD4O95243 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
MBD4O95243 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.62■□□□□ 0.73
MBD4O95243 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.62■□□□□ 0.73
MBD4O95243 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD4O95243 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
MBD4O95243 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.62■□□□□ 0.73
MBD4O95243 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.62■□□□□ 0.73
MBD4O95243 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
MBD4O95243 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD4O95243 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MBD4O95243 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.62■□□□□ 0.73
MBD4O95243 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.62■□□□□ 0.73
MBD4O95243 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD4O95243 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD4O95243 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD4O95243 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD4O95243 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
MBD4O95243 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD4O95243 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MBD4O95243 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.62■□□□□ 0.73
MBD4O95243 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.62■□□□□ 0.73
MBD4O95243 HMGN1P19-201ENST00000436976 333 ntBASIC19.62■□□□□ 0.73
MBD4O95243 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
MBD4O95243 KLF2P3-201ENST00000451977 1087 ntBASIC19.62■□□□□ 0.73
MBD4O95243 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
MBD4O95243 AC125807.1-201ENST00000483097 614 ntBASIC19.62■□□□□ 0.73
MBD4O95243 AC067863.1-201ENST00000494933 530 ntBASIC19.62■□□□□ 0.73
MBD4O95243 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.62■□□□□ 0.73
MBD4O95243 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.62■□□□□ 0.73
MBD4O95243 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
MBD4O95243 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD4O95243 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.62■□□□□ 0.73
MBD4O95243 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
MBD4O95243 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD4O95243 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MBD4O95243 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
MBD4O95243 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
MBD4O95243 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD4O95243 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MBD4O95243 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MBD4O95243 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MBD4O95243 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms