Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLSTN1O94985 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CLSTN1O94985 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLSTN1O94985 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLSTN1O94985 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLSTN1O94985 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLSTN1O94985 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLSTN1O94985 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.36■□□□□ 0.53
CLSTN1O94985 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CLSTN1O94985 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLSTN1O94985 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
CLSTN1O94985 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLSTN1O94985 MRPL20P1-201ENST00000400819 433 ntBASIC18.36■□□□□ 0.53
CLSTN1O94985 MIR940-201ENST00000401276 94 ntBASIC18.36■□□□□ 0.53
CLSTN1O94985 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CLSTN1O94985 FRMD8P1-201ENST00000440433 1524 ntBASIC18.36■□□□□ 0.53
CLSTN1O94985 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.36■□□□□ 0.53
CLSTN1O94985 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLSTN1O94985 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CLSTN1O94985 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.36■□□□□ 0.53
CLSTN1O94985 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLSTN1O94985 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CLSTN1O94985 RNA5SP415-201ENST00000517246 115 ntBASIC18.36■□□□□ 0.53
CLSTN1O94985 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.36■□□□□ 0.53
CLSTN1O94985 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CLSTN1O94985 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.36■□□□□ 0.53
CLSTN1O94985 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.36■□□□□ 0.53
CLSTN1O94985 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.36■□□□□ 0.53
CLSTN1O94985 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC18.36■□□□□ 0.53
CLSTN1O94985 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.36■□□□□ 0.53
CLSTN1O94985 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.36■□□□□ 0.53
CLSTN1O94985 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.36■□□□□ 0.53
CLSTN1O94985 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLSTN1O94985 AC004790.2-201ENST00000623588 572 ntBASIC18.36■□□□□ 0.53
CLSTN1O94985 AL021920.2-201ENST00000624828 1351 ntBASIC18.36■□□□□ 0.53
CLSTN1O94985 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CLSTN1O94985 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLSTN1O94985 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CLSTN1O94985 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLSTN1O94985 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLSTN1O94985 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLSTN1O94985 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLSTN1O94985 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.35■□□□□ 0.53
CLSTN1O94985 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CLSTN1O94985 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLSTN1O94985 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLSTN1O94985 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLSTN1O94985 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLSTN1O94985 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.35■□□□□ 0.53
CLSTN1O94985 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLSTN1O94985 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLSTN1O94985 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.35■□□□□ 0.53
CLSTN1O94985 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.35■□□□□ 0.53
CLSTN1O94985 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CLSTN1O94985 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.35■□□□□ 0.53
CLSTN1O94985 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CLSTN1O94985 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLSTN1O94985 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLSTN1O94985 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.35■□□□□ 0.53
CLSTN1O94985 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.35■□□□□ 0.53
CLSTN1O94985 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.35■□□□□ 0.53
CLSTN1O94985 UNC93B6-202ENST00000528242 690 ntBASIC18.35■□□□□ 0.53
CLSTN1O94985 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.35■□□□□ 0.53
CLSTN1O94985 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.35■□□□□ 0.53
CLSTN1O94985 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLSTN1O94985 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
CLSTN1O94985 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.35■□□□□ 0.53
CLSTN1O94985 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLSTN1O94985 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLSTN1O94985 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLSTN1O94985 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.35■□□□□ 0.53
CLSTN1O94985 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLSTN1O94985 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLSTN1O94985 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.35■□□□□ 0.53
CLSTN1O94985 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLSTN1O94985 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLSTN1O94985 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLSTN1O94985 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CLSTN1O94985 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CLSTN1O94985 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLSTN1O94985 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.35■□□□□ 0.53
CLSTN1O94985 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CLSTN1O94985 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLSTN1O94985 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLSTN1O94985 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLSTN1O94985 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLSTN1O94985 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLSTN1O94985 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CLSTN1O94985 AC026691.1-201ENST00000602502 2017 ntBASIC18.34■□□□□ 0.53
CLSTN1O94985 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
CLSTN1O94985 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
CLSTN1O94985 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLSTN1O94985 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLSTN1O94985 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLSTN1O94985 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CLSTN1O94985 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.34■□□□□ 0.53
CLSTN1O94985 AC087163.2-201ENST00000457299 853 ntBASIC18.34■□□□□ 0.53
CLSTN1O94985 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.34■□□□□ 0.53
CLSTN1O94985 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.34■□□□□ 0.53
CLSTN1O94985 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms