Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 PCDH8P1-201ENST00000428983 2773 ntBASIC17.27■□□□□ 0.36
BEST1O76090 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BEST1O76090 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
BEST1O76090 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BEST1O76090 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
BEST1O76090 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
BEST1O76090 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.27■□□□□ 0.36
BEST1O76090 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.27■□□□□ 0.36
BEST1O76090 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
BEST1O76090 MIR4453-201ENST00000584019 89 ntBASIC17.27■□□□□ 0.36
BEST1O76090 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.27■□□□□ 0.36
BEST1O76090 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.27■□□□□ 0.36
BEST1O76090 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
BEST1O76090 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.27■□□□□ 0.35
BEST1O76090 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.27■□□□□ 0.35
BEST1O76090 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.27■□□□□ 0.35
BEST1O76090 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
BEST1O76090 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.27■□□□□ 0.35
BEST1O76090 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BEST1O76090 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
BEST1O76090 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
BEST1O76090 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.27■□□□□ 0.35
BEST1O76090 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.27■□□□□ 0.35
BEST1O76090 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BEST1O76090 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
BEST1O76090 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
BEST1O76090 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
BEST1O76090 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BEST1O76090 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
BEST1O76090 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BEST1O76090 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
BEST1O76090 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.26■□□□□ 0.35
BEST1O76090 FAM220BP-201ENST00000377689 816 ntBASIC17.26■□□□□ 0.35
BEST1O76090 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.26■□□□□ 0.35
BEST1O76090 CYMP-203ENST00000474680 1263 ntBASIC17.26■□□□□ 0.35
BEST1O76090 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BEST1O76090 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.26■□□□□ 0.35
BEST1O76090 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.26■□□□□ 0.35
BEST1O76090 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BEST1O76090 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.26■□□□□ 0.35
BEST1O76090 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
BEST1O76090 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BEST1O76090 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.26■□□□□ 0.35
BEST1O76090 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BEST1O76090 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
BEST1O76090 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
BEST1O76090 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.26■□□□□ 0.35
BEST1O76090 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BEST1O76090 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BEST1O76090 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.26■□□□□ 0.35
BEST1O76090 OR6D1P-202ENST00000641007 5290 ntBASIC17.26■□□□□ 0.35
BEST1O76090 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BEST1O76090 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BEST1O76090 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
BEST1O76090 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
BEST1O76090 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.26■□□□□ 0.35
BEST1O76090 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BEST1O76090 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BEST1O76090 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BEST1O76090 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BEST1O76090 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
BEST1O76090 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BEST1O76090 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BEST1O76090 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.25■□□□□ 0.35
BEST1O76090 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BEST1O76090 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
BEST1O76090 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
BEST1O76090 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BEST1O76090 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.25■□□□□ 0.35
BEST1O76090 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.25■□□□□ 0.35
BEST1O76090 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
BEST1O76090 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
BEST1O76090 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BEST1O76090 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.25■□□□□ 0.35
BEST1O76090 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BEST1O76090 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
BEST1O76090 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BEST1O76090 HLA-H-201ENST00000383620 1096 ntBASIC17.25■□□□□ 0.35
BEST1O76090 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
BEST1O76090 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
BEST1O76090 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.25■□□□□ 0.35
BEST1O76090 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.25■□□□□ 0.35
BEST1O76090 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.25■□□□□ 0.35
BEST1O76090 AC015911.4-201ENST00000588022 1070 ntBASIC17.25■□□□□ 0.35
BEST1O76090 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BEST1O76090 AC018529.1-201ENST00000613063 361 ntBASIC17.25■□□□□ 0.35
BEST1O76090 MIR6080-201ENST00000617359 66 ntBASIC17.25■□□□□ 0.35
BEST1O76090 AC093512.1-201ENST00000617969 520 ntBASIC17.25■□□□□ 0.35
BEST1O76090 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
BEST1O76090 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
BEST1O76090 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
BEST1O76090 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
BEST1O76090 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BEST1O76090 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BEST1O76090 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.25■□□□□ 0.35
BEST1O76090 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BEST1O76090 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
BEST1O76090 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.25■□□□□ 0.35
BEST1O76090 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
BEST1O76090 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms