Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PMPCBO75439 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
PMPCBO75439 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMPCBO75439 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.81■□□□□ 0.28
PMPCBO75439 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PMPCBO75439 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMPCBO75439 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.81■□□□□ 0.28
PMPCBO75439 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PMPCBO75439 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.81■□□□□ 0.28
PMPCBO75439 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.81■□□□□ 0.28
PMPCBO75439 AC092919.2-201ENST00000623631 1645 ntBASIC16.81■□□□□ 0.28
PMPCBO75439 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PMPCBO75439 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
PMPCBO75439 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
PMPCBO75439 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMPCBO75439 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PMPCBO75439 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PMPCBO75439 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PMPCBO75439 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PMPCBO75439 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PMPCBO75439 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
PMPCBO75439 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PMPCBO75439 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.8■□□□□ 0.28
PMPCBO75439 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PMPCBO75439 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.8■□□□□ 0.28
PMPCBO75439 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PMPCBO75439 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.8■□□□□ 0.28
PMPCBO75439 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PMPCBO75439 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.8■□□□□ 0.28
PMPCBO75439 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PMPCBO75439 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PMPCBO75439 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PMPCBO75439 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PMPCBO75439 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PMPCBO75439 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.8■□□□□ 0.28
PMPCBO75439 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PMPCBO75439 PMS2P4-201ENST00000412466 1052 ntBASIC16.8■□□□□ 0.28
PMPCBO75439 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.8■□□□□ 0.28
PMPCBO75439 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PMPCBO75439 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PMPCBO75439 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.8■□□□□ 0.28
PMPCBO75439 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PMPCBO75439 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PMPCBO75439 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.8■□□□□ 0.28
PMPCBO75439 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PMPCBO75439 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.8■□□□□ 0.28
PMPCBO75439 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PMPCBO75439 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PMPCBO75439 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PMPCBO75439 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PMPCBO75439 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.8■□□□□ 0.28
PMPCBO75439 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PMPCBO75439 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PMPCBO75439 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PMPCBO75439 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PMPCBO75439 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PMPCBO75439 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PMPCBO75439 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PMPCBO75439 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PMPCBO75439 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.79■□□□□ 0.28
PMPCBO75439 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PMPCBO75439 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PMPCBO75439 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PMPCBO75439 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PMPCBO75439 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PMPCBO75439 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PMPCBO75439 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
PMPCBO75439 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
PMPCBO75439 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.79■□□□□ 0.28
PMPCBO75439 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.79■□□□□ 0.28
PMPCBO75439 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PMPCBO75439 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PMPCBO75439 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.79■□□□□ 0.28
PMPCBO75439 AC023274.1-201ENST00000418278 595 ntBASIC16.79■□□□□ 0.28
PMPCBO75439 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.79■□□□□ 0.28
PMPCBO75439 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.79■□□□□ 0.28
PMPCBO75439 POLD2P1-201ENST00000511220 997 ntBASIC16.79■□□□□ 0.28
PMPCBO75439 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.79■□□□□ 0.28
PMPCBO75439 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.79■□□□□ 0.28
PMPCBO75439 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.79■□□□□ 0.28
PMPCBO75439 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.79■□□□□ 0.28
PMPCBO75439 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.79■□□□□ 0.28
PMPCBO75439 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PMPCBO75439 PDPK2P-202ENST00000562415 1191 ntBASIC16.79■□□□□ 0.28
PMPCBO75439 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PMPCBO75439 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.79■□□□□ 0.28
PMPCBO75439 AL009183.1-201ENST00000603760 355 ntBASIC16.79■□□□□ 0.28
PMPCBO75439 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PMPCBO75439 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PMPCBO75439 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.79■□□□□ 0.28
PMPCBO75439 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PMPCBO75439 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PMPCBO75439 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PMPCBO75439 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PMPCBO75439 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PMPCBO75439 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PMPCBO75439 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PMPCBO75439 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PMPCBO75439 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PMPCBO75439 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms