Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC25.08■■□□□ 1.61
PLEKHD1A6NEE1 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
PLEKHD1A6NEE1 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.6
PLEKHD1A6NEE1 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.6
PLEKHD1A6NEE1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PLEKHD1A6NEE1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
PLEKHD1A6NEE1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC25.07■■□□□ 1.6
PLEKHD1A6NEE1 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC25.07■■□□□ 1.6
PLEKHD1A6NEE1 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PLEKHD1A6NEE1 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC25.07■■□□□ 1.6
PLEKHD1A6NEE1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC25.07■■□□□ 1.6
PLEKHD1A6NEE1 KRT8P22-201ENST00000562317 1415 ntBASIC25.07■■□□□ 1.6
PLEKHD1A6NEE1 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PLEKHD1A6NEE1 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC25.07■■□□□ 1.6
PLEKHD1A6NEE1 LBX2-201ENST00000341396 886 ntTSL 3 BASIC25.07■■□□□ 1.6
PLEKHD1A6NEE1 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC25.07■■□□□ 1.6
PLEKHD1A6NEE1 ACTG1P3-201ENST00000431775 1114 ntBASIC25.07■■□□□ 1.6
PLEKHD1A6NEE1 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PLEKHD1A6NEE1 HNRNPA1P13-201ENST00000510646 963 ntBASIC25.07■■□□□ 1.6
PLEKHD1A6NEE1 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC25.07■■□□□ 1.6
PLEKHD1A6NEE1 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC25.07■■□□□ 1.6
PLEKHD1A6NEE1 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC25.07■■□□□ 1.6
PLEKHD1A6NEE1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
PLEKHD1A6NEE1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC25.07■■□□□ 1.6
PLEKHD1A6NEE1 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PLEKHD1A6NEE1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
PLEKHD1A6NEE1 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC25.07■■□□□ 1.6
PLEKHD1A6NEE1 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PLEKHD1A6NEE1 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PLEKHD1A6NEE1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PLEKHD1A6NEE1 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC25.06■■□□□ 1.6
PLEKHD1A6NEE1 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PLEKHD1A6NEE1 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PLEKHD1A6NEE1 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PLEKHD1A6NEE1 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC25.06■■□□□ 1.6
PLEKHD1A6NEE1 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PLEKHD1A6NEE1 KLF2P4-201ENST00000451959 1225 ntBASIC25.06■■□□□ 1.6
PLEKHD1A6NEE1 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PLEKHD1A6NEE1 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
PLEKHD1A6NEE1 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC25.06■■□□□ 1.6
PLEKHD1A6NEE1 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC25.06■■□□□ 1.6
PLEKHD1A6NEE1 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
PLEKHD1A6NEE1 USB1-203ENST00000539737 1212 ntTSL 2 BASIC25.06■■□□□ 1.6
PLEKHD1A6NEE1 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
PLEKHD1A6NEE1 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PLEKHD1A6NEE1 TECR-220ENST00000600083 1204 ntTSL 2 BASIC25.06■■□□□ 1.6
PLEKHD1A6NEE1 MIR6787-201ENST00000616675 61 ntBASIC25.06■■□□□ 1.6
PLEKHD1A6NEE1 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PLEKHD1A6NEE1 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PLEKHD1A6NEE1 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
PLEKHD1A6NEE1 AC005622.1-201ENST00000636801 1703 ntBASIC25.06■■□□□ 1.6
PLEKHD1A6NEE1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PLEKHD1A6NEE1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PLEKHD1A6NEE1 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
PLEKHD1A6NEE1 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
PLEKHD1A6NEE1 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC25.05■■□□□ 1.6
PLEKHD1A6NEE1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
PLEKHD1A6NEE1 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
PLEKHD1A6NEE1 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
PLEKHD1A6NEE1 AL162726.2-201ENST00000438986 1017 ntBASIC25.05■■□□□ 1.6
PLEKHD1A6NEE1 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC25.05■■□□□ 1.6
PLEKHD1A6NEE1 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC25.05■■□□□ 1.6
PLEKHD1A6NEE1 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
PLEKHD1A6NEE1 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC25.05■■□□□ 1.6
PLEKHD1A6NEE1 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC25.05■■□□□ 1.6
PLEKHD1A6NEE1 MIR5189-201ENST00000577370 114 ntBASIC25.05■■□□□ 1.6
PLEKHD1A6NEE1 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC25.05■■□□□ 1.6
PLEKHD1A6NEE1 GPR182-203ENST00000622922 591 ntBASIC25.05■■□□□ 1.6
PLEKHD1A6NEE1 AL158212.4-201ENST00000624062 1286 ntBASIC25.05■■□□□ 1.6
PLEKHD1A6NEE1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
PLEKHD1A6NEE1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
PLEKHD1A6NEE1 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
PLEKHD1A6NEE1 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
PLEKHD1A6NEE1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PLEKHD1A6NEE1 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
PLEKHD1A6NEE1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PLEKHD1A6NEE1 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC25.04■■□□□ 1.6
PLEKHD1A6NEE1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PLEKHD1A6NEE1 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC25.04■■□□□ 1.6
PLEKHD1A6NEE1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC25.04■■□□□ 1.6
PLEKHD1A6NEE1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PLEKHD1A6NEE1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PLEKHD1A6NEE1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PLEKHD1A6NEE1 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PLEKHD1A6NEE1 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC25.04■■□□□ 1.6
PLEKHD1A6NEE1 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC25.04■■□□□ 1.6
PLEKHD1A6NEE1 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC25.04■■□□□ 1.6
PLEKHD1A6NEE1 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC25.04■■□□□ 1.6
PLEKHD1A6NEE1 AC036164.1-201ENST00000570544 333 ntBASIC25.04■■□□□ 1.6
PLEKHD1A6NEE1 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
PLEKHD1A6NEE1 AC133539.2-201ENST00000604757 467 ntBASIC25.04■■□□□ 1.6
PLEKHD1A6NEE1 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PLEKHD1A6NEE1 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PLEKHD1A6NEE1 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PLEKHD1A6NEE1 AC006538.1-201ENST00000567905 1585 ntBASIC25.04■■□□□ 1.6
PLEKHD1A6NEE1 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC25.04■■□□□ 1.6
PLEKHD1A6NEE1 PCGF3-213ENST00000620529 1899 ntBASIC25.04■■□□□ 1.6
PLEKHD1A6NEE1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC25.04■■□□□ 1.6
PLEKHD1A6NEE1 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC25.04■■□□□ 1.6
PLEKHD1A6NEE1 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms