Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.57■□□□□ 0.4
RCCD1A6NED2 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.57■□□□□ 0.4
RCCD1A6NED2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RCCD1A6NED2 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RCCD1A6NED2 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RCCD1A6NED2 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RCCD1A6NED2 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RCCD1A6NED2 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RCCD1A6NED2 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.57■□□□□ 0.4
RCCD1A6NED2 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RCCD1A6NED2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RCCD1A6NED2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RCCD1A6NED2 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RCCD1A6NED2 DUSP5P1-201ENST00000441325 1139 ntBASIC17.57■□□□□ 0.4
RCCD1A6NED2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RCCD1A6NED2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
RCCD1A6NED2 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RCCD1A6NED2 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RCCD1A6NED2 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RCCD1A6NED2 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RCCD1A6NED2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RCCD1A6NED2 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RCCD1A6NED2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.57■□□□□ 0.4
RCCD1A6NED2 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RCCD1A6NED2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RCCD1A6NED2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RCCD1A6NED2 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RCCD1A6NED2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RCCD1A6NED2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.57■□□□□ 0.4
RCCD1A6NED2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
RCCD1A6NED2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.57■□□□□ 0.4
RCCD1A6NED2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.56■□□□□ 0.4
RCCD1A6NED2 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RCCD1A6NED2 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.56■□□□□ 0.4
RCCD1A6NED2 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.56■□□□□ 0.4
RCCD1A6NED2 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.56■□□□□ 0.4
RCCD1A6NED2 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RCCD1A6NED2 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RCCD1A6NED2 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RCCD1A6NED2 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RCCD1A6NED2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
RCCD1A6NED2 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.56■□□□□ 0.4
RCCD1A6NED2 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RCCD1A6NED2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
RCCD1A6NED2 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RCCD1A6NED2 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.56■□□□□ 0.4
RCCD1A6NED2 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.56■□□□□ 0.4
RCCD1A6NED2 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RCCD1A6NED2 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RCCD1A6NED2 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.56■□□□□ 0.4
RCCD1A6NED2 AKR1C7P-201ENST00000305623 895 ntBASIC17.56■□□□□ 0.4
RCCD1A6NED2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.56■□□□□ 0.4
RCCD1A6NED2 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RCCD1A6NED2 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.56■□□□□ 0.4
RCCD1A6NED2 KRT18P31-201ENST00000506277 1292 ntBASIC17.56■□□□□ 0.4
RCCD1A6NED2 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.56■□□□□ 0.4
RCCD1A6NED2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.56■□□□□ 0.4
RCCD1A6NED2 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.56■□□□□ 0.4
RCCD1A6NED2 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RCCD1A6NED2 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RCCD1A6NED2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RCCD1A6NED2 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RCCD1A6NED2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RCCD1A6NED2 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.56■□□□□ 0.4
RCCD1A6NED2 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
RCCD1A6NED2 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RCCD1A6NED2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RCCD1A6NED2 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RCCD1A6NED2 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
RCCD1A6NED2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RCCD1A6NED2 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RCCD1A6NED2 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RCCD1A6NED2 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RCCD1A6NED2 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.55■□□□□ 0.4
RCCD1A6NED2 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RCCD1A6NED2 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.55■□□□□ 0.4
RCCD1A6NED2 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RCCD1A6NED2 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.55■□□□□ 0.4
RCCD1A6NED2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RCCD1A6NED2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.55■□□□□ 0.4
RCCD1A6NED2 MIR648-201ENST00000385046 94 ntBASIC17.55■□□□□ 0.4
RCCD1A6NED2 AC073621.1-201ENST00000392730 636 ntBASIC17.55■□□□□ 0.4
RCCD1A6NED2 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RCCD1A6NED2 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RCCD1A6NED2 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.55■□□□□ 0.4
RCCD1A6NED2 MTATP6P19-201ENST00000413797 659 ntBASIC17.55■□□□□ 0.4
RCCD1A6NED2 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.55■□□□□ 0.4
RCCD1A6NED2 KRT18P27-201ENST00000427733 1299 ntBASIC17.55■□□□□ 0.4
RCCD1A6NED2 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC17.55■□□□□ 0.4
RCCD1A6NED2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.55■□□□□ 0.4
RCCD1A6NED2 RPS15P9-201ENST00000494093 319 ntBASIC17.55■□□□□ 0.4
RCCD1A6NED2 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC17.55■□□□□ 0.4
RCCD1A6NED2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.55■□□□□ 0.4
RCCD1A6NED2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.55■□□□□ 0.4
RCCD1A6NED2 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RCCD1A6NED2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.55■□□□□ 0.4
RCCD1A6NED2 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.55■□□□□ 0.4
RCCD1A6NED2 AC020765.3-201ENST00000613051 740 ntBASIC17.55■□□□□ 0.4
RCCD1A6NED2 PGM5P2-202ENST00000637225 1043 ntBASIC17.55■□□□□ 0.4
RCCD1A6NED2 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms