Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TRBV5-3A0A0A0MS03 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 AL513477.1-201ENST00000602865 2407 ntBASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 HMGA1P7-201ENST00000406908 502 ntBASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 AL356488.2-201ENST00000602755 427 ntBASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 AC021097.1-201ENST00000607902 574 ntBASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 PRAL-201ENST00000624952 3286 ntBASIC15.44■□□□□ 0.06
TRBV5-3A0A0A0MS03 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 MRPL20P1-201ENST00000400819 433 ntBASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 AC108073.2-201ENST00000464002 357 ntBASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 AL031055.1-201ENST00000606362 631 ntBASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms