Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 AC005412.3-201ENST00000580309 715 ntBASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 REXO1L3P-201ENST00000622202 1288 ntBASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 AC004790.2-201ENST00000623588 572 ntBASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 AC117500.6-201ENST00000624871 588 ntBASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.05□□□□□ -0.48
TRGV1A0A0A0MS02 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 ATP6V0CP3-201ENST00000417255 467 ntBASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 STARD13-205ENST00000439831 945 ntTSL 2 BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 AC108751.1-201ENST00000490852 363 ntBASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 AL662844.1-201ENST00000546340 181 ntBASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 AC087641.1-201ENST00000557561 1021 ntBASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 AP001005.1-201ENST00000571755 1248 ntBASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 CYB561-216ENST00000582297 897 ntTSL 3 BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 BSG-214ENST00000614867 960 ntTSL 3 BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 AL139011.1-202ENST00000642063 584 ntBASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 TSPY26P-202ENST00000565928 3884 ntBASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC12.04□□□□□ -0.48
TRGV1A0A0A0MS02 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms