Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 AL645929.1-201ENST00000420084 975 ntBASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 AL512652.2-201ENST00000625156 1716 ntBASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV18A0A075B6X5 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
TRAV18A0A075B6X5 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TRAV18A0A075B6X5 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV18A0A075B6X5 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.27□□□□□ -0.12
TRAV18A0A075B6X5 AL031731.1-201ENST00000642131 2094 ntBASIC14.27□□□□□ -0.12
TRAV18A0A075B6X5 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV18A0A075B6X5 REXO1L8P-201ENST00000604378 1897 ntBASIC14.27□□□□□ -0.12
TRAV18A0A075B6X5 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV18A0A075B6X5 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV18A0A075B6X5 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.27□□□□□ -0.12
TRAV18A0A075B6X5 CDC14C-201ENST00000428251 1719 ntBASIC14.27□□□□□ -0.12
TRAV18A0A075B6X5 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.27□□□□□ -0.12
TRAV18A0A075B6X5 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.12
TRAV18A0A075B6X5 PMPCAP1-201ENST00000508114 1576 ntBASIC14.27□□□□□ -0.12
TRAV18A0A075B6X5 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.27□□□□□ -0.12
TRAV18A0A075B6X5 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV18A0A075B6X5 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.27□□□□□ -0.12
TRAV18A0A075B6X5 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV18A0A075B6X5 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV18A0A075B6X5 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.27□□□□□ -0.12
TRAV18A0A075B6X5 AC243591.1-201ENST00000452967 1364 ntBASIC14.27□□□□□ -0.12
TRAV18A0A075B6X5 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV18A0A075B6X5 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV18A0A075B6X5 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV18A0A075B6X5 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
TRAV18A0A075B6X5 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
TRAV18A0A075B6X5 AC246785.2-201ENST00000432512 513 ntBASIC14.27□□□□□ -0.13
TRAV18A0A075B6X5 AC092647.4-201ENST00000457211 535 ntBASIC14.27□□□□□ -0.13
TRAV18A0A075B6X5 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.27□□□□□ -0.13
TRAV18A0A075B6X5 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.27□□□□□ -0.13
TRAV18A0A075B6X5 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.27□□□□□ -0.13
TRAV18A0A075B6X5 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TRAV18A0A075B6X5 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV18A0A075B6X5 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TRAV18A0A075B6X5 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV18A0A075B6X5 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV18A0A075B6X5 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV18A0A075B6X5 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV18A0A075B6X5 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TRAV18A0A075B6X5 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV18A0A075B6X5 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV18A0A075B6X5 LINC02447-202ENST00000501888 2146 ntBASIC14.27□□□□□ -0.13
TRAV18A0A075B6X5 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV18A0A075B6X5 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV18A0A075B6X5 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV18A0A075B6X5 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV18A0A075B6X5 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV18A0A075B6X5 SNX33P1-201ENST00000592116 1762 ntBASIC14.27□□□□□ -0.13
TRAV18A0A075B6X5 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV18A0A075B6X5 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 TERF1P1-201ENST00000311003 1181 ntBASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 AC113347.1-201ENST00000413321 391 ntBASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 LINC00982-205ENST00000420957 435 ntBASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 VENTXP7-201ENST00000475503 772 ntBASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 TERC-201ENST00000602385 541 ntBASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 AC005363.2-201ENST00000618631 242 ntBASIC14.26□□□□□ -0.13
TRAV18A0A075B6X5 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms