Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CDC42BPBQ9Y5S2 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CDC42BPBQ9Y5S2 KRT8P44-201ENST00000441609 1350 ntBASIC24.49■■□□□ 1.51
CDC42BPBQ9Y5S2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CDC42BPBQ9Y5S2 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
CDC42BPBQ9Y5S2 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CDC42BPBQ9Y5S2 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CDC42BPBQ9Y5S2 RPL28-203ENST00000428193 573 ntTSL 2 BASIC24.49■■□□□ 1.51
CDC42BPBQ9Y5S2 KRT43P-201ENST00000434019 910 ntBASIC24.49■■□□□ 1.51
CDC42BPBQ9Y5S2 RPL28-207ENST00000558815 616 ntTSL 2 BASIC24.49■■□□□ 1.51
CDC42BPBQ9Y5S2 PIGL-212ENST00000581006 554 ntTSL 4 BASIC24.49■■□□□ 1.51
CDC42BPBQ9Y5S2 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC24.49■■□□□ 1.51
CDC42BPBQ9Y5S2 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CDC42BPBQ9Y5S2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CDC42BPBQ9Y5S2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC24.49■■□□□ 1.51
CDC42BPBQ9Y5S2 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CDC42BPBQ9Y5S2 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CDC42BPBQ9Y5S2 AL133338.1-201ENST00000565695 1517 ntBASIC24.48■■□□□ 1.51
CDC42BPBQ9Y5S2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC24.48■■□□□ 1.51
CDC42BPBQ9Y5S2 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC24.48■■□□□ 1.51
CDC42BPBQ9Y5S2 KRT8P22-201ENST00000562317 1415 ntBASIC24.48■■□□□ 1.51
CDC42BPBQ9Y5S2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CDC42BPBQ9Y5S2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CDC42BPBQ9Y5S2 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CDC42BPBQ9Y5S2 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CDC42BPBQ9Y5S2 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
CDC42BPBQ9Y5S2 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
CDC42BPBQ9Y5S2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CDC42BPBQ9Y5S2 HNRNPA1P13-201ENST00000510646 963 ntBASIC24.48■■□□□ 1.51
CDC42BPBQ9Y5S2 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC24.48■■□□□ 1.51
CDC42BPBQ9Y5S2 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC24.48■■□□□ 1.51
CDC42BPBQ9Y5S2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
CDC42BPBQ9Y5S2 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC24.48■■□□□ 1.51
CDC42BPBQ9Y5S2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
CDC42BPBQ9Y5S2 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC24.48■■□□□ 1.51
CDC42BPBQ9Y5S2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
CDC42BPBQ9Y5S2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CDC42BPBQ9Y5S2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CDC42BPBQ9Y5S2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CDC42BPBQ9Y5S2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CDC42BPBQ9Y5S2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC24.47■■□□□ 1.51
CDC42BPBQ9Y5S2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDC42BPBQ9Y5S2 PKIG-203ENST00000372887 769 ntTSL 3 BASIC24.47■■□□□ 1.51
CDC42BPBQ9Y5S2 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
CDC42BPBQ9Y5S2 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC24.47■■□□□ 1.51
CDC42BPBQ9Y5S2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CDC42BPBQ9Y5S2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDC42BPBQ9Y5S2 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDC42BPBQ9Y5S2 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDC42BPBQ9Y5S2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CDC42BPBQ9Y5S2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
CDC42BPBQ9Y5S2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDC42BPBQ9Y5S2 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
CDC42BPBQ9Y5S2 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDC42BPBQ9Y5S2 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC24.47■■□□□ 1.51
CDC42BPBQ9Y5S2 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC24.47■■□□□ 1.51
CDC42BPBQ9Y5S2 RNA5SP412-201ENST00000516234 123 ntBASIC24.47■■□□□ 1.51
CDC42BPBQ9Y5S2 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
CDC42BPBQ9Y5S2 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC24.47■■□□□ 1.51
CDC42BPBQ9Y5S2 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDC42BPBQ9Y5S2 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDC42BPBQ9Y5S2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDC42BPBQ9Y5S2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
CDC42BPBQ9Y5S2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDC42BPBQ9Y5S2 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CDC42BPBQ9Y5S2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC24.46■■□□□ 1.51
CDC42BPBQ9Y5S2 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC24.46■■□□□ 1.51
CDC42BPBQ9Y5S2 RPL7P3-201ENST00000441388 714 ntBASIC24.46■■□□□ 1.51
CDC42BPBQ9Y5S2 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
CDC42BPBQ9Y5S2 AC106760.1-201ENST00000508690 800 ntBASIC24.46■■□□□ 1.51
CDC42BPBQ9Y5S2 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC24.46■■□□□ 1.51
CDC42BPBQ9Y5S2 APRT-204ENST00000563655 709 ntTSL 5 BASIC24.46■■□□□ 1.51
CDC42BPBQ9Y5S2 BTNL10-201ENST00000595971 695 ntBASIC24.46■■□□□ 1.51
CDC42BPBQ9Y5S2 AC244669.2-201ENST00000612320 853 ntBASIC24.46■■□□□ 1.51
CDC42BPBQ9Y5S2 MIR6869-201ENST00000619434 62 ntBASIC24.46■■□□□ 1.51
CDC42BPBQ9Y5S2 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDC42BPBQ9Y5S2 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
CDC42BPBQ9Y5S2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDC42BPBQ9Y5S2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CDC42BPBQ9Y5S2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC24.46■■□□□ 1.51
CDC42BPBQ9Y5S2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
CDC42BPBQ9Y5S2 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC24.45■■□□□ 1.51
CDC42BPBQ9Y5S2 AC139713.2-201ENST00000641328 2723 ntBASIC24.45■■□□□ 1.51
CDC42BPBQ9Y5S2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
CDC42BPBQ9Y5S2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CDC42BPBQ9Y5S2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC24.45■■□□□ 1.5
CDC42BPBQ9Y5S2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.45■■□□□ 1.5
CDC42BPBQ9Y5S2 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CDC42BPBQ9Y5S2 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CDC42BPBQ9Y5S2 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
CDC42BPBQ9Y5S2 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC24.45■■□□□ 1.5
CDC42BPBQ9Y5S2 ACTBP11-201ENST00000436287 1126 ntBASIC24.45■■□□□ 1.5
CDC42BPBQ9Y5S2 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC24.45■■□□□ 1.5
CDC42BPBQ9Y5S2 FAM86LP-201ENST00000478302 853 ntBASIC24.45■■□□□ 1.5
CDC42BPBQ9Y5S2 FXR1-221ENST00000491674 365 ntTSL 2 BASIC24.45■■□□□ 1.5
CDC42BPBQ9Y5S2 SLC25A47P1-201ENST00000531577 414 ntBASIC24.45■■□□□ 1.5
CDC42BPBQ9Y5S2 TDH-203ENST00000531764 1110 ntBASIC24.45■■□□□ 1.5
CDC42BPBQ9Y5S2 TIMM17BP1-201ENST00000545713 516 ntBASIC24.45■■□□□ 1.5
CDC42BPBQ9Y5S2 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC24.45■■□□□ 1.5
CDC42BPBQ9Y5S2 AL359711.2-201ENST00000563105 872 ntBASIC24.45■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms