Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 LINC00628-201ENST00000628516 1289 ntBASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 AC093525.9-201ENST00000624961 1746 ntBASIC15.97■□□□□ 0.15
PCDHGA6Q9Y5G7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 AC092068.3-201ENST00000587894 2016 ntBASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 AC109322.1-201ENST00000524499 1264 ntBASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 AL096865.1-201ENST00000606796 927 ntBASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDHGA6Q9Y5G7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
PCDHGA6Q9Y5G7 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGA6Q9Y5G7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGA6Q9Y5G7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.14
PCDHGA6Q9Y5G7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGA6Q9Y5G7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.96■□□□□ 0.14
PCDHGA6Q9Y5G7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 SPDYE11-202ENST00000450699 704 ntBASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 TIMM8BP1-201ENST00000452384 211 ntBASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 SPDYE9P-201ENST00000570642 692 ntBASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 AC005412.3-201ENST00000580309 715 ntBASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 SPDYE10P-202ENST00000612005 668 ntBASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 SPDYE8P-202ENST00000612377 668 ntBASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGA6Q9Y5G7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 AKAP8P1-201ENST00000434743 1349 ntBASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms