Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PCDHGB1Q9Y5G3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 AC112907.2-201ENST00000448639 330 ntBASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 RN7SL606P-201ENST00000472779 293 ntBASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 AC009533.2-201ENST00000543664 586 ntBASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
PCDHGB1Q9Y5G3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDHGB1Q9Y5G3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PCDHGB1Q9Y5G3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
PCDHGB1Q9Y5G3 AL009178.2-201ENST00000597278 2719 ntBASIC15.21■□□□□ 0.02
PCDHGB1Q9Y5G3 AC006486.2-201ENST00000624246 2199 ntBASIC15.21■□□□□ 0.02
PCDHGB1Q9Y5G3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
PCDHGB1Q9Y5G3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.21■□□□□ 0.02
PCDHGB1Q9Y5G3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
PCDHGB1Q9Y5G3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 LINC02447-202ENST00000501888 2146 ntBASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 AC016027.1-202ENST00000607927 1699 ntBASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 AC090616.6-201ENST00000582640 721 ntBASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PCDHGB1Q9Y5G3 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms