Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 POU5F1P6-201ENST00000466990 990 ntBASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 DOC2GP-204ENST00000639052 2548 ntBASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.16■□□□□ 0.34
AP4E1Q9UPM8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 AP000347.1-202ENST00000435868 847 ntBASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 AC040169.1-201ENST00000565382 521 ntBASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 AP002472.1-201ENST00000577490 586 ntBASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 AC016027.1-202ENST00000607927 1699 ntBASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.15■□□□□ 0.34
AP4E1Q9UPM8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
AP4E1Q9UPM8 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
AP4E1Q9UPM8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AP4E1Q9UPM8 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
AP4E1Q9UPM8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.14■□□□□ 0.33
AP4E1Q9UPM8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
AP4E1Q9UPM8 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4E1Q9UPM8 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4E1Q9UPM8 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.14■□□□□ 0.33
AP4E1Q9UPM8 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4E1Q9UPM8 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4E1Q9UPM8 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
AP4E1Q9UPM8 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4E1Q9UPM8 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.14■□□□□ 0.33
AP4E1Q9UPM8 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.14■□□□□ 0.33
AP4E1Q9UPM8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AP4E1Q9UPM8 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.14■□□□□ 0.33
AP4E1Q9UPM8 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
AP4E1Q9UPM8 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4E1Q9UPM8 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP4E1Q9UPM8 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
AP4E1Q9UPM8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AP4E1Q9UPM8 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.14■□□□□ 0.33
AP4E1Q9UPM8 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.14■□□□□ 0.33
AP4E1Q9UPM8 PGAM5P1-201ENST00000518923 814 ntBASIC17.14■□□□□ 0.33
AP4E1Q9UPM8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.14■□□□□ 0.33
AP4E1Q9UPM8 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.14■□□□□ 0.33
AP4E1Q9UPM8 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.14■□□□□ 0.33
AP4E1Q9UPM8 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.14■□□□□ 0.33
AP4E1Q9UPM8 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AP4E1Q9UPM8 AL671883.3-201ENST00000603274 991 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms