Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 RELA-227ENST00000615805 2236 ntTSL 5 BASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
ECHDC1Q9NTX5 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ECHDC1Q9NTX5 REXO1L8P-201ENST00000604378 1897 ntBASIC20.09■□□□□ 0.81
ECHDC1Q9NTX5 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC20.09■□□□□ 0.81
ECHDC1Q9NTX5 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
ECHDC1Q9NTX5 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
ECHDC1Q9NTX5 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
ECHDC1Q9NTX5 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ECHDC1Q9NTX5 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
ECHDC1Q9NTX5 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ECHDC1Q9NTX5 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ECHDC1Q9NTX5 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ECHDC1Q9NTX5 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ECHDC1Q9NTX5 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC20.09■□□□□ 0.81
ECHDC1Q9NTX5 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.09■□□□□ 0.81
ECHDC1Q9NTX5 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.09■□□□□ 0.81
ECHDC1Q9NTX5 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC20.09■□□□□ 0.81
ECHDC1Q9NTX5 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.09■□□□□ 0.81
ECHDC1Q9NTX5 AC027307.2-201ENST00000591252 911 ntBASIC20.09■□□□□ 0.81
ECHDC1Q9NTX5 AC008267.7-201ENST00000624570 1194 ntBASIC20.09■□□□□ 0.81
ECHDC1Q9NTX5 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC20.09■□□□□ 0.81
ECHDC1Q9NTX5 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC20.09■□□□□ 0.81
ECHDC1Q9NTX5 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ECHDC1Q9NTX5 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ECHDC1Q9NTX5 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ECHDC1Q9NTX5 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ECHDC1Q9NTX5 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ECHDC1Q9NTX5 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ECHDC1Q9NTX5 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ECHDC1Q9NTX5 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ECHDC1Q9NTX5 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.08■□□□□ 0.81
ECHDC1Q9NTX5 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC20.08■□□□□ 0.81
ECHDC1Q9NTX5 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ECHDC1Q9NTX5 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ECHDC1Q9NTX5 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ECHDC1Q9NTX5 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ECHDC1Q9NTX5 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ECHDC1Q9NTX5 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.08■□□□□ 0.81
ECHDC1Q9NTX5 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
ECHDC1Q9NTX5 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.08■□□□□ 0.81
ECHDC1Q9NTX5 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.08■□□□□ 0.81
ECHDC1Q9NTX5 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC20.08■□□□□ 0.81
ECHDC1Q9NTX5 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.08■□□□□ 0.81
ECHDC1Q9NTX5 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC20.08■□□□□ 0.81
ECHDC1Q9NTX5 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.08■□□□□ 0.81
ECHDC1Q9NTX5 AC022145.2-201ENST00000598203 171 ntBASIC20.08■□□□□ 0.81
ECHDC1Q9NTX5 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.08■□□□□ 0.81
ECHDC1Q9NTX5 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.08■□□□□ 0.81
ECHDC1Q9NTX5 AC055717.3-201ENST00000622967 595 ntBASIC20.08■□□□□ 0.81
ECHDC1Q9NTX5 AL513210.1-201ENST00000629608 234 ntBASIC20.08■□□□□ 0.81
ECHDC1Q9NTX5 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
ECHDC1Q9NTX5 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC20.08■□□□□ 0.8
ECHDC1Q9NTX5 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ECHDC1Q9NTX5 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ECHDC1Q9NTX5 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC20.08■□□□□ 0.8
ECHDC1Q9NTX5 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ECHDC1Q9NTX5 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ECHDC1Q9NTX5 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ECHDC1Q9NTX5 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
ECHDC1Q9NTX5 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ECHDC1Q9NTX5 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
ECHDC1Q9NTX5 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
ECHDC1Q9NTX5 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 GCK-209ENST00000616242 2260 ntTSL 5 BASIC20.07■□□□□ 0.8
ECHDC1Q9NTX5 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms