Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCM1Q9NP62 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCM1Q9NP62 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCM1Q9NP62 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCM1Q9NP62 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.16□□□□□ -0.14
GCM1Q9NP62 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
GCM1Q9NP62 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GCM1Q9NP62 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
GCM1Q9NP62 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.16□□□□□ -0.14
GCM1Q9NP62 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCM1Q9NP62 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCM1Q9NP62 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GCM1Q9NP62 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCM1Q9NP62 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCM1Q9NP62 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCM1Q9NP62 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
GCM1Q9NP62 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCM1Q9NP62 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.16□□□□□ -0.14
GCM1Q9NP62 TNRC18P3-201ENST00000441896 2691 ntBASIC14.16□□□□□ -0.14
GCM1Q9NP62 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCM1Q9NP62 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
GCM1Q9NP62 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCM1Q9NP62 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GCM1Q9NP62 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GCM1Q9NP62 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GCM1Q9NP62 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.15□□□□□ -0.14
GCM1Q9NP62 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GCM1Q9NP62 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GCM1Q9NP62 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GCM1Q9NP62 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
GCM1Q9NP62 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GCM1Q9NP62 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GCM1Q9NP62 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GCM1Q9NP62 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GCM1Q9NP62 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.15□□□□□ -0.14
GCM1Q9NP62 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GCM1Q9NP62 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GCM1Q9NP62 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
GCM1Q9NP62 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GCM1Q9NP62 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GCM1Q9NP62 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
GCM1Q9NP62 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GCM1Q9NP62 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
GCM1Q9NP62 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GCM1Q9NP62 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
GCM1Q9NP62 RNU1-129P-201ENST00000384064 167 ntBASIC14.15□□□□□ -0.14
GCM1Q9NP62 KRT18P13-201ENST00000400056 1290 ntBASIC14.15□□□□□ -0.14
GCM1Q9NP62 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.15□□□□□ -0.14
GCM1Q9NP62 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.15□□□□□ -0.14
GCM1Q9NP62 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
GCM1Q9NP62 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GCM1Q9NP62 AP002472.1-201ENST00000577490 586 ntBASIC14.15□□□□□ -0.14
GCM1Q9NP62 U1.21-201ENST00000580816 167 ntBASIC14.15□□□□□ -0.14
GCM1Q9NP62 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.15□□□□□ -0.14
GCM1Q9NP62 AC010327.4-202ENST00000591484 748 ntBASIC14.15□□□□□ -0.14
GCM1Q9NP62 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.15□□□□□ -0.14
GCM1Q9NP62 C20orf181-201ENST00000623918 480 ntBASIC14.15□□□□□ -0.14
GCM1Q9NP62 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.15□□□□□ -0.14
GCM1Q9NP62 AL139011.1-202ENST00000642063 584 ntBASIC14.15□□□□□ -0.14
GCM1Q9NP62 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GCM1Q9NP62 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.15□□□□□ -0.14
GCM1Q9NP62 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
GCM1Q9NP62 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GCM1Q9NP62 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.15□□□□□ -0.14
GCM1Q9NP62 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GCM1Q9NP62 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.15□□□□□ -0.15
GCM1Q9NP62 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
GCM1Q9NP62 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GCM1Q9NP62 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.14□□□□□ -0.15
GCM1Q9NP62 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GCM1Q9NP62 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GCM1Q9NP62 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GCM1Q9NP62 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.14□□□□□ -0.15
GCM1Q9NP62 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GCM1Q9NP62 AL671710.1-201ENST00000610245 2349 ntBASIC14.14□□□□□ -0.15
GCM1Q9NP62 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GCM1Q9NP62 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GCM1Q9NP62 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GCM1Q9NP62 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.14□□□□□ -0.15
GCM1Q9NP62 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.14□□□□□ -0.15
GCM1Q9NP62 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GCM1Q9NP62 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GCM1Q9NP62 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GCM1Q9NP62 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GCM1Q9NP62 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
GCM1Q9NP62 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GCM1Q9NP62 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
GCM1Q9NP62 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.14□□□□□ -0.15
GCM1Q9NP62 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
GCM1Q9NP62 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GCM1Q9NP62 PMS2P4-201ENST00000412466 1052 ntBASIC14.14□□□□□ -0.15
GCM1Q9NP62 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
GCM1Q9NP62 UPF3AP3-201ENST00000420996 769 ntBASIC14.14□□□□□ -0.15
GCM1Q9NP62 GPX1P2-201ENST00000429271 606 ntBASIC14.14□□□□□ -0.15
GCM1Q9NP62 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.14□□□□□ -0.15
GCM1Q9NP62 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.14□□□□□ -0.15
GCM1Q9NP62 AC112191.1-201ENST00000523689 701 ntBASIC14.14□□□□□ -0.15
GCM1Q9NP62 MIR3909-201ENST00000579518 119 ntBASIC14.14□□□□□ -0.15
GCM1Q9NP62 AL031055.1-201ENST00000606362 631 ntBASIC14.14□□□□□ -0.15
GCM1Q9NP62 AC091812.2-201ENST00000619081 385 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms