Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SP110Q9HB58 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SP110Q9HB58 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SP110Q9HB58 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SP110Q9HB58 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.94■□□□□ 0.3
SP110Q9HB58 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SP110Q9HB58 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SP110Q9HB58 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SP110Q9HB58 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SP110Q9HB58 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SP110Q9HB58 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SP110Q9HB58 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SP110Q9HB58 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SP110Q9HB58 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.94■□□□□ 0.3
SP110Q9HB58 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.94■□□□□ 0.3
SP110Q9HB58 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SP110Q9HB58 KRT18P34-201ENST00000488218 1270 ntBASIC16.94■□□□□ 0.3
SP110Q9HB58 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
SP110Q9HB58 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.94■□□□□ 0.3
SP110Q9HB58 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SP110Q9HB58 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SP110Q9HB58 MIR3687-2-201ENST00000577708 61 ntBASIC16.94■□□□□ 0.3
SP110Q9HB58 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
SP110Q9HB58 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.94■□□□□ 0.3
SP110Q9HB58 AC010327.4-202ENST00000591484 748 ntBASIC16.94■□□□□ 0.3
SP110Q9HB58 MIR3687-1-201ENST00000614492 61 ntBASIC16.94■□□□□ 0.3
SP110Q9HB58 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.94■□□□□ 0.3
SP110Q9HB58 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.94■□□□□ 0.3
SP110Q9HB58 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SP110Q9HB58 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.94■□□□□ 0.3
SP110Q9HB58 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SP110Q9HB58 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SP110Q9HB58 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.94■□□□□ 0.3
SP110Q9HB58 WASH6P-202ENST00000359512 1437 ntBASIC16.94■□□□□ 0.3
SP110Q9HB58 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.94■□□□□ 0.3
SP110Q9HB58 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SP110Q9HB58 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SP110Q9HB58 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SP110Q9HB58 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SP110Q9HB58 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SP110Q9HB58 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SP110Q9HB58 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SP110Q9HB58 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SP110Q9HB58 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SP110Q9HB58 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.93■□□□□ 0.3
SP110Q9HB58 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SP110Q9HB58 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SP110Q9HB58 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.93■□□□□ 0.3
SP110Q9HB58 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
SP110Q9HB58 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SP110Q9HB58 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.93■□□□□ 0.3
SP110Q9HB58 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SP110Q9HB58 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SP110Q9HB58 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SP110Q9HB58 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SP110Q9HB58 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SP110Q9HB58 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.93■□□□□ 0.3
SP110Q9HB58 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.93■□□□□ 0.3
SP110Q9HB58 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.93■□□□□ 0.3
SP110Q9HB58 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.93■□□□□ 0.3
SP110Q9HB58 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.93■□□□□ 0.3
SP110Q9HB58 RARRES2P8-201ENST00000566335 367 ntBASIC16.93■□□□□ 0.3
SP110Q9HB58 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.93■□□□□ 0.3
SP110Q9HB58 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.93■□□□□ 0.3
SP110Q9HB58 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SP110Q9HB58 AC099522.2-201ENST00000607001 744 ntBASIC16.93■□□□□ 0.3
SP110Q9HB58 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SP110Q9HB58 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SP110Q9HB58 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SP110Q9HB58 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
SP110Q9HB58 ALOX12P2-203ENST00000570921 1945 ntBASIC16.93■□□□□ 0.3
SP110Q9HB58 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SP110Q9HB58 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SP110Q9HB58 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
SP110Q9HB58 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.93■□□□□ 0.3
SP110Q9HB58 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
SP110Q9HB58 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
SP110Q9HB58 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.93■□□□□ 0.3
SP110Q9HB58 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SP110Q9HB58 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.93■□□□□ 0.3
SP110Q9HB58 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SP110Q9HB58 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SP110Q9HB58 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SP110Q9HB58 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.92■□□□□ 0.3
SP110Q9HB58 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.92■□□□□ 0.3
SP110Q9HB58 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SP110Q9HB58 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SP110Q9HB58 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.92■□□□□ 0.3
SP110Q9HB58 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
SP110Q9HB58 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.92■□□□□ 0.3
SP110Q9HB58 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SP110Q9HB58 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
SP110Q9HB58 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SP110Q9HB58 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SP110Q9HB58 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SP110Q9HB58 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SP110Q9HB58 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SP110Q9HB58 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.92■□□□□ 0.3
SP110Q9HB58 HTR5BP-201ENST00000430851 1154 ntBASIC16.92■□□□□ 0.3
SP110Q9HB58 MKNK2P1-201ENST00000437526 628 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms