Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFCC1Q9HA90 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFCC1Q9HA90 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
EFCC1Q9HA90 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EFCC1Q9HA90 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFCC1Q9HA90 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFCC1Q9HA90 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
EFCC1Q9HA90 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFCC1Q9HA90 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFCC1Q9HA90 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.22■□□□□ 0.67
EFCC1Q9HA90 AC087499.6-201ENST00000411576 835 ntBASIC19.22■□□□□ 0.67
EFCC1Q9HA90 DFFBP1-201ENST00000433250 979 ntBASIC19.22■□□□□ 0.67
EFCC1Q9HA90 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC19.22■□□□□ 0.67
EFCC1Q9HA90 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC19.22■□□□□ 0.67
EFCC1Q9HA90 AC022210.1-201ENST00000449856 793 ntBASIC19.22■□□□□ 0.67
EFCC1Q9HA90 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EFCC1Q9HA90 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC19.22■□□□□ 0.67
EFCC1Q9HA90 MPDU1-223ENST00000582151 728 ntBASIC19.22■□□□□ 0.67
EFCC1Q9HA90 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.22■□□□□ 0.67
EFCC1Q9HA90 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFCC1Q9HA90 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EFCC1Q9HA90 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EFCC1Q9HA90 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.22■□□□□ 0.67
EFCC1Q9HA90 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
EFCC1Q9HA90 AC131009.4-201ENST00000624048 1740 ntBASIC19.22■□□□□ 0.67
EFCC1Q9HA90 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
EFCC1Q9HA90 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EFCC1Q9HA90 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC19.21■□□□□ 0.67
EFCC1Q9HA90 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
EFCC1Q9HA90 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFCC1Q9HA90 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFCC1Q9HA90 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EFCC1Q9HA90 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
EFCC1Q9HA90 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
EFCC1Q9HA90 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EFCC1Q9HA90 LINC00896-202ENST00000609602 2128 ntBASIC19.21■□□□□ 0.67
EFCC1Q9HA90 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFCC1Q9HA90 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EFCC1Q9HA90 AC142381.1-201ENST00000426099 345 ntBASIC19.21■□□□□ 0.67
EFCC1Q9HA90 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EFCC1Q9HA90 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC19.21■□□□□ 0.67
EFCC1Q9HA90 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC19.21■□□□□ 0.67
EFCC1Q9HA90 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.21■□□□□ 0.67
EFCC1Q9HA90 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.21■□□□□ 0.67
EFCC1Q9HA90 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFCC1Q9HA90 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFCC1Q9HA90 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
EFCC1Q9HA90 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.21■□□□□ 0.67
EFCC1Q9HA90 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFCC1Q9HA90 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFCC1Q9HA90 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFCC1Q9HA90 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.21■□□□□ 0.67
EFCC1Q9HA90 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EFCC1Q9HA90 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC19.21■□□□□ 0.67
EFCC1Q9HA90 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EFCC1Q9HA90 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.21■□□□□ 0.67
EFCC1Q9HA90 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.21■□□□□ 0.67
EFCC1Q9HA90 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
EFCC1Q9HA90 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EFCC1Q9HA90 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EFCC1Q9HA90 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EFCC1Q9HA90 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EFCC1Q9HA90 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EFCC1Q9HA90 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
EFCC1Q9HA90 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EFCC1Q9HA90 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EFCC1Q9HA90 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.2■□□□□ 0.66
EFCC1Q9HA90 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EFCC1Q9HA90 SLC25A1P3-201ENST00000395415 828 ntBASIC19.2■□□□□ 0.66
EFCC1Q9HA90 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EFCC1Q9HA90 TEX28P1-201ENST00000613479 1221 ntBASIC19.2■□□□□ 0.66
EFCC1Q9HA90 TEX28P2-201ENST00000617764 1221 ntBASIC19.2■□□□□ 0.66
EFCC1Q9HA90 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
EFCC1Q9HA90 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EFCC1Q9HA90 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EFCC1Q9HA90 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EFCC1Q9HA90 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.2■□□□□ 0.66
EFCC1Q9HA90 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EFCC1Q9HA90 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
EFCC1Q9HA90 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.2■□□□□ 0.66
EFCC1Q9HA90 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.2■□□□□ 0.66
EFCC1Q9HA90 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
EFCC1Q9HA90 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
EFCC1Q9HA90 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
EFCC1Q9HA90 AL391825.1-201ENST00000457671 1364 ntBASIC19.19■□□□□ 0.66
EFCC1Q9HA90 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.19■□□□□ 0.66
EFCC1Q9HA90 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.19■□□□□ 0.66
EFCC1Q9HA90 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.19■□□□□ 0.66
EFCC1Q9HA90 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.19■□□□□ 0.66
EFCC1Q9HA90 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EFCC1Q9HA90 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EFCC1Q9HA90 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.19■□□□□ 0.66
EFCC1Q9HA90 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.19■□□□□ 0.66
EFCC1Q9HA90 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EFCC1Q9HA90 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
EFCC1Q9HA90 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EFCC1Q9HA90 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.19■□□□□ 0.66
EFCC1Q9HA90 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.19■□□□□ 0.66
EFCC1Q9HA90 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.19■□□□□ 0.66
EFCC1Q9HA90 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms