Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
UBE2OQ9C0C9 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 ANKRD19P-201ENST00000338192 862 ntBASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 AL079307.3-201ENST00000556114 283 ntBASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 AP001350.2-201ENST00000625104 1094 ntBASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
UBE2OQ9C0C9 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 ELK1P1-201ENST00000485699 580 ntBASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 KRT18P34-201ENST00000488218 1270 ntBASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 AC105021.1-202ENST00000570572 669 ntBASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE2OQ9C0C9 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.14■□□□□ 0.5
UBE2OQ9C0C9 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
UBE2OQ9C0C9 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.14■□□□□ 0.5
UBE2OQ9C0C9 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
UBE2OQ9C0C9 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
UBE2OQ9C0C9 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
UBE2OQ9C0C9 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.14■□□□□ 0.5
UBE2OQ9C0C9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBE2OQ9C0C9 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBE2OQ9C0C9 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBE2OQ9C0C9 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBE2OQ9C0C9 AC084018.2-201ENST00000613093 2607 ntBASIC18.14■□□□□ 0.49
UBE2OQ9C0C9 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.14■□□□□ 0.49
UBE2OQ9C0C9 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBE2OQ9C0C9 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.14■□□□□ 0.49
UBE2OQ9C0C9 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBE2OQ9C0C9 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBE2OQ9C0C9 AL080243.2-201ENST00000418783 582 ntBASIC18.14■□□□□ 0.49
UBE2OQ9C0C9 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms