Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NKX6-2Q9C056 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NKX6-2Q9C056 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.46□□□□□ -0.26
NKX6-2Q9C056 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NKX6-2Q9C056 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NKX6-2Q9C056 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
NKX6-2Q9C056 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.46□□□□□ -0.26
NKX6-2Q9C056 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NKX6-2Q9C056 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
NKX6-2Q9C056 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC13.46□□□□□ -0.26
NKX6-2Q9C056 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NKX6-2Q9C056 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NKX6-2Q9C056 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.46□□□□□ -0.26
NKX6-2Q9C056 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NKX6-2Q9C056 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 FAM197Y1-201ENST00000421178 764 ntBASIC13.45□□□□□ -0.26
NKX6-2Q9C056 CCR12P-201ENST00000446203 998 ntBASIC13.45□□□□□ -0.26
NKX6-2Q9C056 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 NUDT16P1-203ENST00000513809 620 ntBASIC13.45□□□□□ -0.26
NKX6-2Q9C056 BX088651.1-201ENST00000540551 451 ntBASIC13.45□□□□□ -0.26
NKX6-2Q9C056 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 AP005242.2-201ENST00000580065 1175 ntBASIC13.45□□□□□ -0.26
NKX6-2Q9C056 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 AC104771.1-201ENST00000603335 964 ntBASIC13.45□□□□□ -0.26
NKX6-2Q9C056 CD177P1-201ENST00000606252 935 ntBASIC13.45□□□□□ -0.26
NKX6-2Q9C056 AL023803.3-201ENST00000615559 522 ntBASIC13.45□□□□□ -0.26
NKX6-2Q9C056 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.45□□□□□ -0.26
NKX6-2Q9C056 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 ESRRAP1-201ENST00000400596 1257 ntBASIC13.44□□□□□ -0.26
NKX6-2Q9C056 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 SAPCD2P4-201ENST00000424595 1171 ntBASIC13.44□□□□□ -0.26
NKX6-2Q9C056 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
NKX6-2Q9C056 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms