Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 AC024681.1-201ENST00000521917 487 ntBASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 NDUFC2-202ENST00000525085 495 ntTSL 3 BASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 POLE2-203ENST00000553805 496 ntTSL 2 BASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 CHORDC2P-201ENST00000557601 1090 ntBASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 AC005261.5-201ENST00000596280 355 ntBASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 AC010319.5-201ENST00000598950 759 ntBASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 HMGB1P51-201ENST00000605166 638 ntBASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 MIR4787-201ENST00000607364 84 ntBASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 AC020663.3-201ENST00000614098 1091 ntBASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 EEF1A1P33-201ENST00000554413 1362 ntBASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 MTND5P6-201ENST00000422338 1798 ntBASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 DNAAF4-203ENST00000448430 1445 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 OR7E47P-201ENST00000546390 1422 ntBASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 CHMP3-204ENST00000409727 1851 ntTSL 2 BASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC10.49□□□□□ -0.73
KRTAP3-3Q9BYR6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 ASPH-207ENST00000517847 1947 ntTSL 5 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 AC133637.1-201ENST00000624115 1537 ntBASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 ZNF733P-202ENST00000444809 1573 ntBASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 BLNK-202ENST00000371176 1715 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 NSMCE2-201ENST00000287437 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 Y_RNA.38-201ENST00000362617 102 ntBASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 INIP-201ENST00000374234 713 ntTSL 2 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 DTX3L-202ENST00000383661 687 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 RNU6-784P-201ENST00000384330 106 ntBASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 RNU6-1122P-201ENST00000384449 107 ntBASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 SNORD115-47-201ENST00000391226 86 ntBASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 IGF1-203ENST00000392904 761 ntTSL 5 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 SDCBPP3-201ENST00000419629 891 ntBASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 AC023128.2-201ENST00000420880 1223 ntBASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 WT1-AS_7.1-201ENST00000426618 294 ntBASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 EMC3-202ENST00000429759 751 ntTSL 3 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 INGX-202ENST00000489074 768 ntBASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 AL133372.1-201ENST00000493565 745 ntBASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 RPL4P1-201ENST00000496596 1278 ntBASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 RN7SKP34-201ENST00000516142 244 ntBASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 RNU6-406P-201ENST00000516470 107 ntBASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 NATP-201ENST00000523491 878 ntBASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 CINP-202ENST00000536961 845 ntTSL 3 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 KRT125P-201ENST00000546827 989 ntBASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 AC034102.4-201ENST00000548595 434 ntTSL 5 BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 AC023310.3-201ENST00000557027 670 ntBASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 AC090515.3-201ENST00000560431 315 ntBASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 AC100756.1-201ENST00000562736 682 ntBASIC10.48□□□□□ -0.73
KRTAP3-3Q9BYR6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms