Protein–RNA interactions for Protein: Q99435

NELL2, Protein kinase C-binding protein NELL2, humanhuman

Predictions only

Length 816 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELL2Q99435 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NELL2Q99435 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NELL2Q99435 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NELL2Q99435 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NELL2Q99435 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NELL2Q99435 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NELL2Q99435 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.73■□□□□ 0.27
NELL2Q99435 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NELL2Q99435 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NELL2Q99435 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NELL2Q99435 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
NELL2Q99435 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NELL2Q99435 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NELL2Q99435 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NELL2Q99435 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
NELL2Q99435 AC009053.2-201ENST00000563701 2365 ntBASIC16.72■□□□□ 0.27
NELL2Q99435 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.72■□□□□ 0.27
NELL2Q99435 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.72■□□□□ 0.27
NELL2Q99435 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NELL2Q99435 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NELL2Q99435 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NELL2Q99435 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NELL2Q99435 AC022210.1-201ENST00000449856 793 ntBASIC16.72■□□□□ 0.27
NELL2Q99435 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.72■□□□□ 0.27
NELL2Q99435 SDHAP3-202ENST00000515467 728 ntBASIC16.72■□□□□ 0.27
NELL2Q99435 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.72■□□□□ 0.27
NELL2Q99435 AC026979.3-201ENST00000607315 403 ntBASIC16.72■□□□□ 0.27
NELL2Q99435 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.72■□□□□ 0.27
NELL2Q99435 AC099568.2-201ENST00000609194 695 ntBASIC16.72■□□□□ 0.27
NELL2Q99435 AC007431.3-201ENST00000623221 587 ntBASIC16.72■□□□□ 0.27
NELL2Q99435 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NELL2Q99435 AC099398.1-201ENST00000567919 2776 ntBASIC16.72■□□□□ 0.27
NELL2Q99435 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.72■□□□□ 0.27
NELL2Q99435 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NELL2Q99435 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NELL2Q99435 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.72■□□□□ 0.27
NELL2Q99435 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NELL2Q99435 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NELL2Q99435 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.72■□□□□ 0.27
NELL2Q99435 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
NELL2Q99435 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.72■□□□□ 0.27
NELL2Q99435 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
NELL2Q99435 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NELL2Q99435 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NELL2Q99435 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NELL2Q99435 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NELL2Q99435 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
NELL2Q99435 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.71■□□□□ 0.27
NELL2Q99435 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.71■□□□□ 0.27
NELL2Q99435 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NELL2Q99435 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.71■□□□□ 0.27
NELL2Q99435 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NELL2Q99435 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NELL2Q99435 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NELL2Q99435 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NELL2Q99435 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NELL2Q99435 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NELL2Q99435 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
NELL2Q99435 TTTY23B-201ENST00000442790 549 ntBASIC16.71■□□□□ 0.27
NELL2Q99435 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.71■□□□□ 0.27
NELL2Q99435 AC044860.1-202ENST00000559481 777 ntBASIC16.71■□□□□ 0.27
NELL2Q99435 AP005482.1-201ENST00000563722 1273 ntBASIC16.71■□□□□ 0.27
NELL2Q99435 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NELL2Q99435 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.71■□□□□ 0.27
NELL2Q99435 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NELL2Q99435 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
NELL2Q99435 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NELL2Q99435 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.71■□□□□ 0.27
NELL2Q99435 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NELL2Q99435 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NELL2Q99435 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
NELL2Q99435 AC108860.2-201ENST00000562760 2183 ntBASIC16.71■□□□□ 0.27
NELL2Q99435 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NELL2Q99435 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NELL2Q99435 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NELL2Q99435 TUBB8P12-201ENST00000308911 1335 ntBASIC16.7■□□□□ 0.26
NELL2Q99435 TUBB7P-202ENST00000428444 1305 ntBASIC16.7■□□□□ 0.26
NELL2Q99435 TUBB8P7-204ENST00000567960 1332 ntBASIC16.7■□□□□ 0.26
NELL2Q99435 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NELL2Q99435 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NELL2Q99435 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NELL2Q99435 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NELL2Q99435 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NELL2Q99435 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.7■□□□□ 0.26
NELL2Q99435 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NELL2Q99435 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NELL2Q99435 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NELL2Q99435 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.7■□□□□ 0.26
NELL2Q99435 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NELL2Q99435 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.7■□□□□ 0.26
NELL2Q99435 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NELL2Q99435 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NELL2Q99435 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.7■□□□□ 0.26
NELL2Q99435 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.7■□□□□ 0.26
NELL2Q99435 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.7■□□□□ 0.26
NELL2Q99435 SRD5A3P1-201ENST00000603021 949 ntBASIC16.7■□□□□ 0.26
NELL2Q99435 AL033527.5-202ENST00000641632 1098 ntBASIC16.7■□□□□ 0.26
NELL2Q99435 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NELL2Q99435 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NELL2Q99435 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms