Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
YME1L1Q96TA2 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.65■□□□□ 0.42
YME1L1Q96TA2 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.65■□□□□ 0.42
YME1L1Q96TA2 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
YME1L1Q96TA2 AL033527.5-202ENST00000641632 1098 ntBASIC17.65■□□□□ 0.42
YME1L1Q96TA2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
YME1L1Q96TA2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
YME1L1Q96TA2 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
YME1L1Q96TA2 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
YME1L1Q96TA2 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
YME1L1Q96TA2 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
YME1L1Q96TA2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
YME1L1Q96TA2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
YME1L1Q96TA2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
YME1L1Q96TA2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
YME1L1Q96TA2 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.42
YME1L1Q96TA2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
YME1L1Q96TA2 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
YME1L1Q96TA2 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.64■□□□□ 0.41
YME1L1Q96TA2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
YME1L1Q96TA2 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.64■□□□□ 0.41
YME1L1Q96TA2 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.64■□□□□ 0.41
YME1L1Q96TA2 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.64■□□□□ 0.41
YME1L1Q96TA2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
YME1L1Q96TA2 AC008764.6-201ENST00000595909 2069 ntBASIC17.64■□□□□ 0.41
YME1L1Q96TA2 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.64■□□□□ 0.41
YME1L1Q96TA2 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.64■□□□□ 0.41
YME1L1Q96TA2 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.64■□□□□ 0.41
YME1L1Q96TA2 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
YME1L1Q96TA2 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
YME1L1Q96TA2 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.64■□□□□ 0.41
YME1L1Q96TA2 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
YME1L1Q96TA2 MYCLP2-201ENST00000449268 967 ntBASIC17.64■□□□□ 0.41
YME1L1Q96TA2 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
YME1L1Q96TA2 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
YME1L1Q96TA2 SDHAP3-202ENST00000515467 728 ntBASIC17.64■□□□□ 0.41
YME1L1Q96TA2 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.64■□□□□ 0.41
YME1L1Q96TA2 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.64■□□□□ 0.41
YME1L1Q96TA2 SRD5A3P1-201ENST00000603021 949 ntBASIC17.64■□□□□ 0.41
YME1L1Q96TA2 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.64■□□□□ 0.41
YME1L1Q96TA2 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.64■□□□□ 0.41
YME1L1Q96TA2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
YME1L1Q96TA2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
YME1L1Q96TA2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.64■□□□□ 0.41
YME1L1Q96TA2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
YME1L1Q96TA2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
YME1L1Q96TA2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
YME1L1Q96TA2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
YME1L1Q96TA2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
YME1L1Q96TA2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.64■□□□□ 0.41
YME1L1Q96TA2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
YME1L1Q96TA2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
YME1L1Q96TA2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 RN7SL837P-201ENST00000463010 287 ntBASIC17.63■□□□□ 0.41
YME1L1Q96TA2 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 KRT8P12-202ENST00000472924 1397 ntBASIC17.63■□□□□ 0.41
YME1L1Q96TA2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
YME1L1Q96TA2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
YME1L1Q96TA2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
YME1L1Q96TA2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
YME1L1Q96TA2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
YME1L1Q96TA2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.62■□□□□ 0.41
YME1L1Q96TA2 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
YME1L1Q96TA2 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
YME1L1Q96TA2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
YME1L1Q96TA2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
YME1L1Q96TA2 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
YME1L1Q96TA2 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
YME1L1Q96TA2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms