Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 GUK1-206ENST00000366723 845 ntTSL 5 BASIC26.78■■□□□ 1.88
IFT140Q96RY7 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
IFT140Q96RY7 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC26.78■■□□□ 1.88
IFT140Q96RY7 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
IFT140Q96RY7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC26.78■■□□□ 1.88
IFT140Q96RY7 RPSAP36-202ENST00000494591 1261 ntBASIC26.78■■□□□ 1.88
IFT140Q96RY7 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC26.78■■□□□ 1.88
IFT140Q96RY7 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
IFT140Q96RY7 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC26.78■■□□□ 1.88
IFT140Q96RY7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC26.78■■□□□ 1.88
IFT140Q96RY7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC26.78■■□□□ 1.88
IFT140Q96RY7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
IFT140Q96RY7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC26.78■■□□□ 1.88
IFT140Q96RY7 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
IFT140Q96RY7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
IFT140Q96RY7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
IFT140Q96RY7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
IFT140Q96RY7 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
IFT140Q96RY7 AC091046.1-201ENST00000331871 207 ntBASIC26.77■■□□□ 1.88
IFT140Q96RY7 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
IFT140Q96RY7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
IFT140Q96RY7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
IFT140Q96RY7 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC26.77■■□□□ 1.88
IFT140Q96RY7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC26.77■■□□□ 1.88
IFT140Q96RY7 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
IFT140Q96RY7 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC26.77■■□□□ 1.88
IFT140Q96RY7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC26.77■■□□□ 1.88
IFT140Q96RY7 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC26.77■■□□□ 1.88
IFT140Q96RY7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC26.77■■□□□ 1.88
IFT140Q96RY7 EEF1DP1-201ENST00000585891 896 ntBASIC26.77■■□□□ 1.88
IFT140Q96RY7 AC091812.3-201ENST00000621362 345 ntBASIC26.77■■□□□ 1.88
IFT140Q96RY7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
IFT140Q96RY7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
IFT140Q96RY7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
IFT140Q96RY7 AC018735.1-201ENST00000437208 1502 ntBASIC26.77■■□□□ 1.88
IFT140Q96RY7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
IFT140Q96RY7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC26.77■■□□□ 1.88
IFT140Q96RY7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
IFT140Q96RY7 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
IFT140Q96RY7 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC26.76■■□□□ 1.88
IFT140Q96RY7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.88
IFT140Q96RY7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
IFT140Q96RY7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
IFT140Q96RY7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
IFT140Q96RY7 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC26.76■■□□□ 1.87
IFT140Q96RY7 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
IFT140Q96RY7 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC26.76■■□□□ 1.87
IFT140Q96RY7 KRT18P64-201ENST00000434946 1219 ntBASIC26.76■■□□□ 1.87
IFT140Q96RY7 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
IFT140Q96RY7 RN7SL769P-201ENST00000469386 295 ntBASIC26.76■■□□□ 1.87
IFT140Q96RY7 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC26.76■■□□□ 1.87
IFT140Q96RY7 MBP-227ENST00000526111 581 ntTSL 4 BASIC26.76■■□□□ 1.87
IFT140Q96RY7 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC26.76■■□□□ 1.87
IFT140Q96RY7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
IFT140Q96RY7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC26.76■■□□□ 1.87
IFT140Q96RY7 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
IFT140Q96RY7 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC26.76■■□□□ 1.87
IFT140Q96RY7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
IFT140Q96RY7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC26.76■■□□□ 1.87
IFT140Q96RY7 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
IFT140Q96RY7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC26.75■■□□□ 1.87
IFT140Q96RY7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
IFT140Q96RY7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
IFT140Q96RY7 TEX30-203ENST00000376022 828 ntTSL 2 BASIC26.75■■□□□ 1.87
IFT140Q96RY7 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC26.75■■□□□ 1.87
IFT140Q96RY7 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
IFT140Q96RY7 ACR-203ENST00000529621 708 ntTSL 5 BASIC26.75■■□□□ 1.87
IFT140Q96RY7 AC078819.1-201ENST00000547454 765 ntBASIC26.75■■□□□ 1.87
IFT140Q96RY7 AC012085.1-201ENST00000548270 765 ntBASIC26.75■■□□□ 1.87
IFT140Q96RY7 MIR4741-201ENST00000579822 90 ntBASIC26.75■■□□□ 1.87
IFT140Q96RY7 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC26.75■■□□□ 1.87
IFT140Q96RY7 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC26.75■■□□□ 1.87
IFT140Q96RY7 AC000095.1-201ENST00000603208 874 ntBASIC26.75■■□□□ 1.87
IFT140Q96RY7 AC138951.2-201ENST00000623455 1161 ntBASIC26.75■■□□□ 1.87
IFT140Q96RY7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
IFT140Q96RY7 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC26.75■■□□□ 1.87
IFT140Q96RY7 U82695.1-201ENST00000635752 1889 ntBASIC26.75■■□□□ 1.87
IFT140Q96RY7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
IFT140Q96RY7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
IFT140Q96RY7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
IFT140Q96RY7 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
IFT140Q96RY7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC26.75■■□□□ 1.87
IFT140Q96RY7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
IFT140Q96RY7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
IFT140Q96RY7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC26.75■■□□□ 1.87
IFT140Q96RY7 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
IFT140Q96RY7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
IFT140Q96RY7 IGF1-203ENST00000392904 761 ntTSL 5 BASIC26.74■■□□□ 1.87
IFT140Q96RY7 HNRNPA1P32-201ENST00000396326 963 ntBASIC26.74■■□□□ 1.87
IFT140Q96RY7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC26.74■■□□□ 1.87
IFT140Q96RY7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC26.74■■□□□ 1.87
IFT140Q96RY7 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
IFT140Q96RY7 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC26.74■■□□□ 1.87
IFT140Q96RY7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
IFT140Q96RY7 TNXA-203ENST00000507684 2038 ntBASIC26.74■■□□□ 1.87
IFT140Q96RY7 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC26.74■■□□□ 1.87
IFT140Q96RY7 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC26.74■■□□□ 1.87
IFT140Q96RY7 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC26.74■■□□□ 1.87
IFT140Q96RY7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
IFT140Q96RY7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms