Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSPG4P5Q96PW8 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 AL513523.2-202ENST00000427283 2040 ntBASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSPG4P5Q96PW8 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG4P5Q96PW8 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG4P5Q96PW8 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG4P5Q96PW8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG4P5Q96PW8 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG4P5Q96PW8 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CSPG4P5Q96PW8 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CSPG4P5Q96PW8 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG4P5Q96PW8 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG4P5Q96PW8 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG4P5Q96PW8 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG4P5Q96PW8 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
CSPG4P5Q96PW8 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG4P5Q96PW8 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG4P5Q96PW8 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.02■□□□□ 0.32
CSPG4P5Q96PW8 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG4P5Q96PW8 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG4P5Q96PW8 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.02■□□□□ 0.32
CSPG4P5Q96PW8 AC002056.1-201ENST00000395613 760 ntBASIC17.02■□□□□ 0.32
CSPG4P5Q96PW8 KRT18P34-201ENST00000488218 1270 ntBASIC17.02■□□□□ 0.32
CSPG4P5Q96PW8 POLD2P1-201ENST00000511220 997 ntBASIC17.02■□□□□ 0.32
CSPG4P5Q96PW8 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG4P5Q96PW8 PGAM5P1-201ENST00000518923 814 ntBASIC17.02■□□□□ 0.32
CSPG4P5Q96PW8 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG4P5Q96PW8 AL671883.3-201ENST00000603274 991 ntBASIC17.02■□□□□ 0.32
CSPG4P5Q96PW8 AC099522.2-201ENST00000607001 744 ntBASIC17.02■□□□□ 0.32
CSPG4P5Q96PW8 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CSPG4P5Q96PW8 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSPG4P5Q96PW8 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.02■□□□□ 0.31
CSPG4P5Q96PW8 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSPG4P5Q96PW8 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CSPG4P5Q96PW8 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CSPG4P5Q96PW8 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.02■□□□□ 0.31
CSPG4P5Q96PW8 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CSPG4P5Q96PW8 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CSPG4P5Q96PW8 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSPG4P5Q96PW8 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CSPG4P5Q96PW8 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.01■□□□□ 0.31
CSPG4P5Q96PW8 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.01■□□□□ 0.31
CSPG4P5Q96PW8 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSPG4P5Q96PW8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSPG4P5Q96PW8 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSPG4P5Q96PW8 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CSPG4P5Q96PW8 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSPG4P5Q96PW8 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSPG4P5Q96PW8 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSPG4P5Q96PW8 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSPG4P5Q96PW8 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.01■□□□□ 0.31
CSPG4P5Q96PW8 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.01■□□□□ 0.31
CSPG4P5Q96PW8 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.01■□□□□ 0.31
CSPG4P5Q96PW8 AP000347.1-202ENST00000435868 847 ntBASIC17.01■□□□□ 0.31
CSPG4P5Q96PW8 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CSPG4P5Q96PW8 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CSPG4P5Q96PW8 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CSPG4P5Q96PW8 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CSPG4P5Q96PW8 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSPG4P5Q96PW8 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSPG4P5Q96PW8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSPG4P5Q96PW8 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
CSPG4P5Q96PW8 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
CSPG4P5Q96PW8 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CSPG4P5Q96PW8 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.01■□□□□ 0.31
CSPG4P5Q96PW8 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms