Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.27□□□□□ -0.13
CMTM3Q96MX0 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.27□□□□□ -0.13
CMTM3Q96MX0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.27□□□□□ -0.13
CMTM3Q96MX0 AC020765.3-201ENST00000613051 740 ntBASIC14.27□□□□□ -0.13
CMTM3Q96MX0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
CMTM3Q96MX0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CMTM3Q96MX0 AC066615.1-201ENST00000640911 628 ntBASIC14.27□□□□□ -0.13
CMTM3Q96MX0 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CMTM3Q96MX0 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
CMTM3Q96MX0 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CMTM3Q96MX0 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CMTM3Q96MX0 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.27□□□□□ -0.13
CMTM3Q96MX0 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CMTM3Q96MX0 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CMTM3Q96MX0 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CMTM3Q96MX0 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CMTM3Q96MX0 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CMTM3Q96MX0 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CMTM3Q96MX0 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CMTM3Q96MX0 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 AL592424.1-201ENST00000563624 1536 ntBASIC14.26□□□□□ -0.13
CMTM3Q96MX0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 HOMER2P1-201ENST00000455653 964 ntBASIC14.26□□□□□ -0.13
CMTM3Q96MX0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 LINC01101-201ENST00000622953 1884 ntBASIC14.26□□□□□ -0.13
CMTM3Q96MX0 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 AC007292.2-201ENST00000593524 1812 ntBASIC14.26□□□□□ -0.13
CMTM3Q96MX0 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 AC148477.5-201ENST00000625164 1645 ntBASIC14.26□□□□□ -0.13
CMTM3Q96MX0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CMTM3Q96MX0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CMTM3Q96MX0 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.25□□□□□ -0.13
CMTM3Q96MX0 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CMTM3Q96MX0 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CMTM3Q96MX0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CMTM3Q96MX0 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CMTM3Q96MX0 SIGLEC16-201ENST00000599858 1437 ntBASIC14.25□□□□□ -0.13
CMTM3Q96MX0 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.25□□□□□ -0.13
CMTM3Q96MX0 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CMTM3Q96MX0 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CMTM3Q96MX0 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CMTM3Q96MX0 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CMTM3Q96MX0 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CMTM3Q96MX0 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CMTM3Q96MX0 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CMTM3Q96MX0 AL590787.1-201ENST00000568856 1315 ntBASIC14.25□□□□□ -0.13
CMTM3Q96MX0 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CMTM3Q96MX0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.25□□□□□ -0.13
CMTM3Q96MX0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CMTM3Q96MX0 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CMTM3Q96MX0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CMTM3Q96MX0 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CMTM3Q96MX0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CMTM3Q96MX0 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
CMTM3Q96MX0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CMTM3Q96MX0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CMTM3Q96MX0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CMTM3Q96MX0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CMTM3Q96MX0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms