Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
ALPK3Q96L96 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
ALPK3Q96L96 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALPK3Q96L96 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALPK3Q96L96 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.67■□□□□ 0.42
ALPK3Q96L96 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ALPK3Q96L96 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALPK3Q96L96 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ALPK3Q96L96 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALPK3Q96L96 AC091046.1-201ENST00000331871 207 ntBASIC17.67■□□□□ 0.42
ALPK3Q96L96 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALPK3Q96L96 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.67■□□□□ 0.42
ALPK3Q96L96 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ALPK3Q96L96 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.67■□□□□ 0.42
ALPK3Q96L96 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.67■□□□□ 0.42
ALPK3Q96L96 AC124947.2-201ENST00000547118 1133 ntBASIC17.67■□□□□ 0.42
ALPK3Q96L96 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.67■□□□□ 0.42
ALPK3Q96L96 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.67■□□□□ 0.42
ALPK3Q96L96 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.67■□□□□ 0.42
ALPK3Q96L96 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALPK3Q96L96 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ALPK3Q96L96 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ALPK3Q96L96 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ALPK3Q96L96 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.67■□□□□ 0.42
ALPK3Q96L96 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALPK3Q96L96 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.67■□□□□ 0.42
ALPK3Q96L96 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALPK3Q96L96 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
ALPK3Q96L96 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALPK3Q96L96 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ALPK3Q96L96 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALPK3Q96L96 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALPK3Q96L96 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
ALPK3Q96L96 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALPK3Q96L96 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.66■□□□□ 0.42
ALPK3Q96L96 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.66■□□□□ 0.42
ALPK3Q96L96 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ALPK3Q96L96 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALPK3Q96L96 MPRIPP1-201ENST00000452433 1089 ntBASIC17.66■□□□□ 0.42
ALPK3Q96L96 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.66■□□□□ 0.42
ALPK3Q96L96 HNRNPUP1-201ENST00000554987 333 ntBASIC17.66■□□□□ 0.42
ALPK3Q96L96 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.66■□□□□ 0.42
ALPK3Q96L96 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC17.66■□□□□ 0.42
ALPK3Q96L96 AC090164.3-201ENST00000610780 2143 ntBASIC17.66■□□□□ 0.42
ALPK3Q96L96 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALPK3Q96L96 AC006277.1-201ENST00000624348 1610 ntBASIC17.66■□□□□ 0.42
ALPK3Q96L96 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.66■□□□□ 0.42
ALPK3Q96L96 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ALPK3Q96L96 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALPK3Q96L96 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.66■□□□□ 0.42
ALPK3Q96L96 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.66■□□□□ 0.42
ALPK3Q96L96 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALPK3Q96L96 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALPK3Q96L96 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ALPK3Q96L96 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ALPK3Q96L96 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ALPK3Q96L96 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ALPK3Q96L96 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALPK3Q96L96 AL607033.1-201ENST00000623900 1599 ntBASIC17.66■□□□□ 0.42
ALPK3Q96L96 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.66■□□□□ 0.42
ALPK3Q96L96 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALPK3Q96L96 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALPK3Q96L96 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ALPK3Q96L96 AC135050.7-201ENST00000624508 2218 ntBASIC17.66■□□□□ 0.42
ALPK3Q96L96 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALPK3Q96L96 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.66■□□□□ 0.42
ALPK3Q96L96 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ALPK3Q96L96 AC005332.8-201ENST00000622750 2735 ntBASIC17.66■□□□□ 0.42
ALPK3Q96L96 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ALPK3Q96L96 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ALPK3Q96L96 AC134915.1-201ENST00000426461 574 ntBASIC17.66■□□□□ 0.42
ALPK3Q96L96 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.66■□□□□ 0.42
ALPK3Q96L96 AC005077.2-201ENST00000449786 690 ntBASIC17.66■□□□□ 0.42
ALPK3Q96L96 AKR7A2P1-201ENST00000460134 915 ntBASIC17.66■□□□□ 0.42
ALPK3Q96L96 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.66■□□□□ 0.42
ALPK3Q96L96 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ALPK3Q96L96 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC17.66■□□□□ 0.42
ALPK3Q96L96 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
ALPK3Q96L96 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.66■□□□□ 0.42
ALPK3Q96L96 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC17.66■□□□□ 0.42
ALPK3Q96L96 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.66■□□□□ 0.42
ALPK3Q96L96 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALPK3Q96L96 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALPK3Q96L96 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ALPK3Q96L96 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.65■□□□□ 0.42
ALPK3Q96L96 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.65■□□□□ 0.42
ALPK3Q96L96 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.65■□□□□ 0.42
ALPK3Q96L96 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALPK3Q96L96 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.65■□□□□ 0.42
ALPK3Q96L96 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.65■□□□□ 0.42
ALPK3Q96L96 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ALPK3Q96L96 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.65■□□□□ 0.42
ALPK3Q96L96 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ALPK3Q96L96 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.65■□□□□ 0.42
ALPK3Q96L96 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.65■□□□□ 0.42
ALPK3Q96L96 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALPK3Q96L96 AL390961.4-201ENST00000623958 2535 ntBASIC17.65■□□□□ 0.42
ALPK3Q96L96 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALPK3Q96L96 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.65■□□□□ 0.42
ALPK3Q96L96 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms