Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX27Q96L92 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX27Q96L92 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.78■□□□□ 0.44
SNX27Q96L92 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.78■□□□□ 0.44
SNX27Q96L92 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.78■□□□□ 0.44
SNX27Q96L92 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.78■□□□□ 0.44
SNX27Q96L92 DUX4L27-201ENST00000554796 1261 ntBASIC17.78■□□□□ 0.44
SNX27Q96L92 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.78■□□□□ 0.44
SNX27Q96L92 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNX27Q96L92 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.78■□□□□ 0.44
SNX27Q96L92 AC018529.1-201ENST00000613063 361 ntBASIC17.78■□□□□ 0.44
SNX27Q96L92 AL358472.5-202ENST00000641448 1267 ntBASIC17.78■□□□□ 0.44
SNX27Q96L92 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX27Q96L92 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX27Q96L92 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX27Q96L92 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX27Q96L92 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.78■□□□□ 0.44
SNX27Q96L92 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.78■□□□□ 0.44
SNX27Q96L92 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX27Q96L92 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX27Q96L92 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNX27Q96L92 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.78■□□□□ 0.44
SNX27Q96L92 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX27Q96L92 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.78■□□□□ 0.44
SNX27Q96L92 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SNX27Q96L92 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNX27Q96L92 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.77■□□□□ 0.44
SNX27Q96L92 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.77■□□□□ 0.44
SNX27Q96L92 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNX27Q96L92 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.77■□□□□ 0.44
SNX27Q96L92 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNX27Q96L92 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.77■□□□□ 0.44
SNX27Q96L92 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.77■□□□□ 0.44
SNX27Q96L92 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.77■□□□□ 0.44
SNX27Q96L92 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNX27Q96L92 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SNX27Q96L92 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SNX27Q96L92 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNX27Q96L92 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNX27Q96L92 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.77■□□□□ 0.44
SNX27Q96L92 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNX27Q96L92 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNX27Q96L92 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNX27Q96L92 AC107890.1-201ENST00000422478 521 ntBASIC17.77■□□□□ 0.44
SNX27Q96L92 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.77■□□□□ 0.44
SNX27Q96L92 INGX-202ENST00000489074 768 ntBASIC17.77■□□□□ 0.44
SNX27Q96L92 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.77■□□□□ 0.44
SNX27Q96L92 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.77■□□□□ 0.44
SNX27Q96L92 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.77■□□□□ 0.44
SNX27Q96L92 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.77■□□□□ 0.44
SNX27Q96L92 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.77■□□□□ 0.44
SNX27Q96L92 MIR4453-201ENST00000584019 89 ntBASIC17.77■□□□□ 0.44
SNX27Q96L92 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNX27Q96L92 AL390955.2-201ENST00000603032 514 ntBASIC17.77■□□□□ 0.44
SNX27Q96L92 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNX27Q96L92 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNX27Q96L92 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNX27Q96L92 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SNX27Q96L92 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SNX27Q96L92 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SNX27Q96L92 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
SNX27Q96L92 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SNX27Q96L92 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.77■□□□□ 0.43
SNX27Q96L92 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.77■□□□□ 0.43
SNX27Q96L92 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SNX27Q96L92 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SNX27Q96L92 OR6D1P-202ENST00000641007 5290 ntBASIC17.77■□□□□ 0.43
SNX27Q96L92 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SNX27Q96L92 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX27Q96L92 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNX27Q96L92 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.76■□□□□ 0.43
SNX27Q96L92 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNX27Q96L92 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX27Q96L92 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNX27Q96L92 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SNX27Q96L92 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SNX27Q96L92 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX27Q96L92 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.76■□□□□ 0.43
SNX27Q96L92 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SNX27Q96L92 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SNX27Q96L92 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.76■□□□□ 0.43
SNX27Q96L92 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNX27Q96L92 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX27Q96L92 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX27Q96L92 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.76■□□□□ 0.43
SNX27Q96L92 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
SNX27Q96L92 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX27Q96L92 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX27Q96L92 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNX27Q96L92 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX27Q96L92 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
SNX27Q96L92 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNX27Q96L92 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SNX27Q96L92 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.76■□□□□ 0.43
SNX27Q96L92 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.76■□□□□ 0.43
SNX27Q96L92 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNX27Q96L92 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.75■□□□□ 0.43
SNX27Q96L92 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNX27Q96L92 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNX27Q96L92 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms