Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.4■□□□□ 0.22
SCAMP4Q969E2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAMP4Q969E2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SCAMP4Q969E2 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
SCAMP4Q969E2 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.4■□□□□ 0.22
SCAMP4Q969E2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCAMP4Q969E2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCAMP4Q969E2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.4■□□□□ 0.22
SCAMP4Q969E2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.4■□□□□ 0.22
SCAMP4Q969E2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAMP4Q969E2 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SCAMP4Q969E2 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
SCAMP4Q969E2 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SCAMP4Q969E2 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 AC084121.4-201ENST00000641598 221 ntBASIC16.39■□□□□ 0.21
SCAMP4Q969E2 AF228730.8-201ENST00000642140 221 ntBASIC16.39■□□□□ 0.21
SCAMP4Q969E2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SCAMP4Q969E2 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 AC142381.1-201ENST00000426099 345 ntBASIC16.38■□□□□ 0.21
SCAMP4Q969E2 GPS2P2-201ENST00000430745 888 ntBASIC16.38■□□□□ 0.21
SCAMP4Q969E2 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 AC105233.2-201ENST00000523697 349 ntBASIC16.38■□□□□ 0.21
SCAMP4Q969E2 AC109322.1-201ENST00000524499 1264 ntBASIC16.38■□□□□ 0.21
SCAMP4Q969E2 AF228730.5-201ENST00000530288 346 ntBASIC16.38■□□□□ 0.21
SCAMP4Q969E2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 AC073389.1-201ENST00000595595 795 ntBASIC16.38■□□□□ 0.21
SCAMP4Q969E2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 FOXO1B-201ENST00000504678 1527 ntBASIC16.38■□□□□ 0.21
SCAMP4Q969E2 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SCAMP4Q969E2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SCAMP4Q969E2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms